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Protein
Submitted name:

LysR-like protein

Gene
N/A
Organism
Streptomyces coelicolor
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
LysR-like proteinImported
OrganismiStreptomyces coelicolorImported
Taxonomic identifieri1902 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO3919.

Structurei

3D structure databases

ProteinModelPortaliQ53869.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 5858HTH lysR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108WET. Bacteria.
ENOG4111FFK. LUCA.
HOGENOMiHOG000233522.
PhylomeDBiQ53869.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q53869-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLALLRTFV TVHRAGSFTR AAALLGLSQP AVTSQIRTLE RQLGRPLFLR
60 70 80 90 100
QARGVTPTTI GDELAHKAAP HLDALVEIAE TGLEDDSTLR TLHLAGPPEF
110 120 130 140 150
TAERALPALG ELTGEDGQAF ALRASFGNAE ETLEGLAAGH HDLAIGTTRP
160 170 180 190 200
RGALHTATPL CDEVHVLVAT PHWAERAGVE DVRDTDASAL KHVPVVEVHE
210 220 230 240 250
SLPFVGRYWA SVFDARPASP ATVVAPDLRA VLACAVAGAG LAVLPRYLCA
260 270 280 290 300
EALERGDVVA LHDPPVPPLR TYFLVVRTGT LAMPHIARAH EWLLRAAADW

N
Length:301
Mass (Da):32,151
Last modified:November 1, 1996 - v1
Checksum:i7A480D01DC1F9090
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U37580 Genomic DNA. Translation: AAC43616.1.
PIRiT37172.

Genome annotation databases

PATRICi23737624. VBIStrCoe124346_3993.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U37580 Genomic DNA. Translation: AAC43616.1.
PIRiT37172.

3D structure databases

ProteinModelPortaliQ53869.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO3919.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

PATRICi23737624. VBIStrCoe124346_3993.

Phylogenomic databases

eggNOGiENOG4108WET. Bacteria.
ENOG4111FFK. LUCA.
HOGENOMiHOG000233522.
PhylomeDBiQ53869.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ53869_STRCH
AccessioniPrimary (citable) accession number: Q53869
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: February 17, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.