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Protein
Submitted name:

Pencillin binding protein 4

Gene

pbpD

Organism
Staphylococcus aureus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Protein family/group databases

MEROPSiS11.010.

Names & Taxonomyi

Protein namesi
Submitted name:
Pencillin binding protein 4Imported
Gene namesi
Name:pbpDImported
OrganismiStaphylococcus aureusImported
Taxonomic identifieri1280 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei402 – 42322HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence analysisAdd
BLAST
Chaini25 – 431407Sequence analysisPRO_5004248586Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi93062.SACOL0699.

Structurei

3D structure databases

ProteinModelPortaliQ53613.
SMRiQ53613. Positions 19-383.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini56 – 288233Peptidase_S11InterPro annotationAdd
BLAST
Domaini317 – 38266DUF1958InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the peptidase S11 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105DZ1. Bacteria.
COG1686. LUCA.

Family and domain databases

Gene3Di2.30.140.20. 1 hit.
3.40.710.10. 1 hit.
InterProiIPR012338. Beta-lactam/transpept-like.
IPR015294. Pen-bd_prot4_C_dom.
IPR015956. Peniciliin-bd_prot-assoc.
IPR018044. Peptidase_S11.
IPR001967. Peptidase_S11_N.
[Graphical view]
PfamiPF09211. DUF1958. 1 hit.
PF00768. Peptidase_S11. 1 hit.
[Graphical view]
PRINTSiPR00725. DADACBPTASE1.
SUPFAMiSSF56601. SSF56601. 1 hit.
SSF69189. SSF69189. 1 hit.

Sequencei

Sequence statusi: Complete.

Q53613-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNLISIIII LCLTLSIMTP YAQATNSDVT PVQAANQYGY AGLSAAYEPT
60 70 80 90 100
SAVNVSQTGQ LLYQYNIDTK WNPASMTKLM TMYLTLEAVN KGQLSLDDTV
110 120 130 140 150
TMTNKEYIMS TLPELSNTKL YPGQVWTIAD LLQITVSNSS NAAALILAKK
160 170 180 190 200
VSKNTSDFVD LMNNKAKAIG MKNTHFVNPT GAENSRLRTF APTKYKDQEA
210 220 230 240 250
TVSTARDYAI LDLHVIKETP KILDFTKQLA PTTHAVTYYT FNFSLEGAKM
260 270 280 290 300
SLPGTDGLKT GSSDTANYNH TITTKRGKFR INQVIMGAGD YKNLGGEKQR
310 320 330 340 350
NMMGNALMER SFDQYKYVKI LSKGEQRING KKYYVENDLY DVLPSDFSKK
360 370 380 390 400
DYKLVVEDGK VHADYPREFI NKDYGPPTVE VHQPIIQKAN TVAKSMWEEH
410 420 430
PLFTIIGGTC LVAGLALIVH MIINRLFRKR K
Length:431
Mass (Da):48,162
Last modified:May 1, 1997 - v2
Checksum:i41A638D8D81D56CB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29454 Genomic DNA. Translation: AAB50178.1.
PIRiJC4555.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29454 Genomic DNA. Translation: AAB50178.1.
PIRiJC4555.

3D structure databases

ProteinModelPortaliQ53613.
SMRiQ53613. Positions 19-383.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi93062.SACOL0699.

Protein family/group databases

MEROPSiS11.010.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4105DZ1. Bacteria.
COG1686. LUCA.

Family and domain databases

Gene3Di2.30.140.20. 1 hit.
3.40.710.10. 1 hit.
InterProiIPR012338. Beta-lactam/transpept-like.
IPR015294. Pen-bd_prot4_C_dom.
IPR015956. Peniciliin-bd_prot-assoc.
IPR018044. Peptidase_S11.
IPR001967. Peptidase_S11_N.
[Graphical view]
PfamiPF09211. DUF1958. 1 hit.
PF00768. Peptidase_S11. 1 hit.
[Graphical view]
PRINTSiPR00725. DADACBPTASE1.
SUPFAMiSSF56601. SSF56601. 1 hit.
SSF69189. SSF69189. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ53613_STAAU
AccessioniPrimary (citable) accession number: Q53613
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: May 1, 1997
Last modified: March 16, 2016
This is version 70 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.