Q53245 (GLND_RHITR) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase
Short name=PII uridylyl-transferase
EC=2.7.7.59

Alternative name(s):
UTase
Uridylyl-removing enzyme

Gene names

Name:

glnD

Organism

Rhizobium tropici

Taxonomic identifier

398 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	948 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (GlnB) regulatory protein By similarity. HAMAP-Rule MF_00277
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP-Rule MF_00277
Sequence similarities	Belongs to the GlnD family.
Sequence caution	The sequence AAC32290.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Biological process	Nitrogen fixation
Molecular function	Nucleotidyltransferase Transferase
Gene Ontology (GO)
Biological_process	nitrogen fixation Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: EC amino acid binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 948	948	[Protein-PII] uridylyltransferase HAMAP-Rule MF_00277		PRO_0000192761

Sequences

	Sequence		Length	Mass (Da)
	Q53245 [UniParc]. Last modified May 30, 2000. Version 2. Checksum: 9CCE1A43545213BD	FASTA	948	106,423
	10 20 30 40 50 60 METHHIDFST VLDVSALKAE CEALAKRGLD KNEERSALLA LLKKASQDGR EEARRLLIAD 70 80 90 100 110 120 GSGLNCAHRI SWLQDQIITV LYDLTVHHAY PKQAGVFSVT AVGGYGRDTL APGSDIDLLF 130 140 150 160 170 180 LFQPKPASET HKAVEFILYM LWDMGFKVGH ATRSVEECIR EAKSDMTVRT AILETRYICG 190 200 210 220 230 240 NVALERELQA RFDKEIVTNT GPEFIAAKLA ERDERHRKAG DTRYLVEPNV KEGKGGLRDL 250 260 270 280 290 300 HTLFWISKYY YHVRDPAELV KLGVLSKQEY RLFEKAEDFL WAVRCHMHFL TGKAEERLSF 310 320 330 340 350 360 DIQRDIAAAL DYNARPGLSA VERFMKHYFL VAKDVGDLTR ILCAALEDQQ AKATPGLTGV 370 380 390 400 410 420 ISRFANRSRK IPGTVEFVED RGRIALANPD VFKRDPVSLI RLFFVADING LEFHPDALKR 430 440 450 460 470 480 VTRSLSLIDN DLRENEEANR LFLSILTSKR DPALILRRMN EAGVLGRFIP EFGKIVSMMQ 490 500 510 520 530 540 FNMYHHYTVD EHLIRAVEVL SEIDKGRAED IHPLTNKLMP NIEDRDALYV AVLLHDIAKG 550 560 570 580 590 600 REEDHSEAGA AVARKLCPRF GLSPKQTELV VWLIAEHLTM SMVAQTRDLT DRKTIIDFAD 610 620 630 640 650 660 RVQSLDRLKM LLILTVCDIR AVGPGVWNGW KGQLLRTLYY ETELLLSGGF SEVSRKERAE 670 680 690 700 710 720 AAAEALEHAL ADWSQKERKA YVKLHYQPYL LSVPLEDQIR HTQFMRESDK AGKVLATMVR 730 740 750 760 770 780 TDSFHAITEI TVLSPDHPRL LTVIAGACAA AGANIADAQI FTTSDGRALD TIHVSREFPD 790 800 810 820 830 840 DADELRRAAT IGKMIEDVLA GRKRLPEVIA TRTKNRRKNK AFVIPPSVII TNSLSNKFTV 850 860 870 880 890 900 IEVECLDRPG LLSEITAVLS DLSLDIQSAR ITTFGEKVID TFYVADLVGQ KISNENRRAY 910 920 930 940 ITARLKAVMA GEEDEMRERM PSGIIAPAAT RGVAVEKSDT EKKAGSAA

References

[1]	O'Connell K.P., Raffel S.J., Saville B.J., Handelsman J. Submitted (JAN-1996) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: CIAT899.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U47030 Genomic DNA. Translation: AAC32290.1. Different initiation.
3D structure databases
ProteinModelPortal	Q53245.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
Gene3D	1.10.3210.10. 1 hit.
HAMAP	MF_00277. PII_uridylyl-transf.
InterPro	IPR002912. ACT_dom. IPR010043. GlnD_Uridyltrans. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
PANTHER	PTHR13734:SF1. PTHR13734:SF1. 1 hit.
Pfam	PF01842. ACT. 2 hits. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLND_RHITR

Accession

Primary (citable) accession number: Q53245

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 30, 2000
Last sequence update:	May 30, 2000
Last modified:	May 29, 2013
This is version 67 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program