Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Regulatory protein PpsR

Gene

ppsR

Organism
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Regulatory protein PpsRImported
Gene namesi
Name:ppsRImported
OrganismiRhodobacter sphaeroides (Rhodopseudomonas sphaeroides)Imported
Taxonomic identifieri1063 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter

Interactioni

Protein-protein interaction databases

STRINGi272943.RSP_0282.

Structurei

3D structure databases

ProteinModelPortaliQ53221.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini147 – 19953PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105D4D. Bacteria.
ENOG410XPHT. LUCA.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR000014. PAS.
IPR011785. Tscrpt_reg_PpsR-CrtJ.
[Graphical view]
PfamiPF02954. HTH_8. 1 hit.
PF13188. PAS_8. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSiPR01590. HTHFIS.
SMARTiSM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR02040. PpsR-CrtJ. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q53221-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAGGSLPSL APDLVRDLVA TAADISLLVS QEGVVREVMA NPHHPSFGQL
60 70 80 90 100
SEWEGRPLEE VLTAESVAKF RLRSEGLEPG RGSVAVELNH IDPRSFEFPI
110 120 130 140 150
RYILHRLPAD RSILMLGRDL RPIAEVQQQL VAAQLAMERD YETQREMETR
160 170 180 190 200
YRVVLDVSRD PMVLVSMSTG RIVDLNSAAG LLLGGVRQDL LGAAIAQEFE
210 220 230 240 250
GRRRGEFMET MTNLAATESA APVEVLARRS QKRLLVVPRV FRAAGERLLL
260 270 280 290 300
CQIDPADATQ PVGDELSENL ARLYHEGVDG IVFSDADGTI RGANEAFLNM
310 320 330 340 350
TDSSSLAAIR GRSIADFLAR GSVDLRVLID SVRRTGQLRL YATRLTTDFA
360 370 380 390 400
GQIAAEISAT WLDDRERPLL VLVVRDTSRA DTMRRPVPAT GVIDEPARNV
410 420 430 440 450
MELVGNSTLK DIVAETTDVV EKMCIETALE LTRNNRVAAA EMLSLSRQSL
460
YVKLRKFGLL NKDE
Length:464
Mass (Da):51,148
Last modified:November 1, 1996 - v1
Checksum:iB9C49E4C5240659F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19596 Genomic DNA. Translation: AAA67554.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19596 Genomic DNA. Translation: AAA67554.1.

3D structure databases

ProteinModelPortaliQ53221.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272943.RSP_0282.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4105D4D. Bacteria.
ENOG410XPHT. LUCA.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR000014. PAS.
IPR011785. Tscrpt_reg_PpsR-CrtJ.
[Graphical view]
PfamiPF02954. HTH_8. 1 hit.
PF13188. PAS_8. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSiPR01590. HTHFIS.
SMARTiSM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR02040. PpsR-CrtJ. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "A gene from the photosynthetic cluster of Rhodobacter sphaeroides induces trans suppression of bacteriochlorophyll and carotenoid levels in R.sphaeroides and R.capsulata."
    Penfold R.J., Pemberton J.M.
    Curr. Microbiol. 23:259-263(1991)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: RS6258Imported.
  2. "Sequencing, chromosomal inactivation, and functional expression in Escherichia coli of ppsR, a gene which represses carotenoid and bacteriochlorophyll synthesis in Rhodobacter sphaeroides."
    Penfold R.J., Pemberton J.M.
    J. Bacteriol. 176:2869-2876(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: RS6258Imported.
  3. "Domain structure, oligomeric state, and mutational analysis of PpsR, the Rhodobacter sphaeroides repressor of photosystem gene expression."
    Gomelsky M., Horne I.M., Lee H.J., Pemberton J.M., McEwan A.G., Kaplan S.
    J. Bacteriol. 182:2253-2261(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: RS6258Imported.
  4. "PpsS regulates the expression of photosynthesis genes in Rhodobacter sphaeroides in response to changes in light intensity."
    Dodd H.N., McEwan A.G., Pemberton J.M.
    Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: RS6258Imported.

Entry informationi

Entry nameiQ53221_RHOSH
AccessioniPrimary (citable) accession number: Q53221
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: December 9, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.