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Q53208 (FIXC_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein FixC
Gene names
Name:fixC
Ordered Locus Names:NGR_a01240
ORF Names:y4uP
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length435 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Could be required for the formation of a functional nitrogenase Fe protein. Probably accepts electrons from FixA/FixB and reduces a quinone.

Cofactor

FAD Potential.

Sequence similarities

Belongs to the ETF-QO/FixC family.

Ontologies

Keywords
   Biological processNitrogen fixation
   LigandFAD
Flavoprotein
   Molecular functionOxidoreductase
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Biological_processnitrogen fixation

Inferred from electronic annotation. Source: UniProtKB-KW

tRNA processing

Inferred from electronic annotation. Source: InterPro

   Molecular_functionflavin adenine dinucleotide binding

Inferred from electronic annotation. Source: InterPro

oxidoreductase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 435435Protein FixC
PRO_0000200689

Regions

Nucleotide binding8 – 2215FAD Potential

Sequences

Sequence LengthMass (Da)Tools
Q53208 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 5C4113C66F84BA61

FASTA43547,536
        10         20         30         40         50         60 
MTEERFDAIV VGAGMSGNAA AYTMASRGLK VLQLERGEYP GSKNVQGAIL YANMLETIIP 

        70         80         90        100        110        120 
DFRDDAPLER HLVEQRFWVT DDTSHTGMHY RSDDFNEPAP NRYTIIRAQF DKWFSRKVRA 

       130        140        150        160        170        180 
AGAIVLCETT VTELALDAAG KVIGVHTDRA GGVIHADVVV LAEGVNGLLG TRARFRKVPK 

       190        200        210        220        230        240 
PEAVALAVKE MHFLPEEVIN ERFGLTGDQG CVIEAAGTIS RGMAGLGFLY TNKESISLGI 

       250        260        270        280        290        300 
GCLVSHFAAT LESPYALLDA FKNHPSIRPL LAGSEIKEYA AHLIPEGGFK AIPQLFGDGW 

       310        320        330        340        350        360 
VVVGDAAQLN NAVHREGSNL AMTSGRIAGE AIAAIKSRKH PMTSDNLSLY KAMLDKSFVL 

       370        380        390        400        410        420 
KDLRKYKDMP ALLHTNSHNF FTTYPQLMSQ AAQNFVRVDG TPKIEKERAT TAALIKARSR 

       430 
WGLVSDAVRL ALAWR 

« Hide

References

« Hide 'large scale' references
[1]"Sequencing the 500-kb GC-rich symbiotic replicon of Rhizobium sp. NGR234 using dye terminators and a thermostable 'sequenase': a beginning."
Freiberg C., Perret X., Broughton W.J., Rosenthal A.
Genome Res. 6:590-600(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[3]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z68203 Genomic DNA. Translation: CAA92415.1.
U00090 Genomic DNA. Translation: AAB91888.1.
RefSeqNP_444101.1. NC_000914.2.

3D structure databases

ProteinModelPortalQ53208.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a01240.

Proteomic databases

ProMEXQ53208.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91888; AAB91888; NGR_a01240.
GeneID962191.
KEGGrhi:NGR_a01240.
PATRIC32300945. VBIRhiSp122450_0108.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0644.
HOGENOMHOG000018936.
KOK00313.
OMAAILYADM.
OrthoDBEOG6716K7.
ProtClustDBCLSK2299088.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6175-MONOMER.

Family and domain databases

InterProIPR002218. GIDA-rel.
[Graphical view]
PfamPF01134. GIDA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameFIXC_RHISN
AccessionPrimary (citable) accession number: Q53208
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: November 13, 2013
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names