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Q53192

- Y4TQ_RHISN

UniProt

Q53192 - Y4TQ_RHISN

Protein

Probable peptide ABC transporter permease protein y4tQ

Gene

NGR_a01420

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Functioni

    Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane.

    GO - Biological processi

    1. amino acid transport Source: UniProtKB-KW

    Keywords - Biological processi

    Amino-acid transport, Transport

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6193-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable peptide ABC transporter permease protein y4tQ
    Gene namesi
    Ordered Locus Names:NGR_a01420
    ORF Names:y4tQ
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    Subcellular locationi

    Cell inner membrane Curated; Multi-pass membrane protein PROSITE-ProRule annotation

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 291291Probable peptide ABC transporter permease protein y4tQPRO_0000060300Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a01420.

    Structurei

    3D structure databases

    ProteinModelPortaliQ53192.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei28 – 4821HelicalPROSITE-ProRule annotationAdd
    BLAST
    Transmembranei92 – 11221HelicalPROSITE-ProRule annotationAdd
    BLAST
    Transmembranei137 – 15721HelicalPROSITE-ProRule annotationAdd
    BLAST
    Transmembranei213 – 23321HelicalPROSITE-ProRule annotationAdd
    BLAST
    Transmembranei249 – 26921HelicalPROSITE-ProRule annotationAdd
    BLAST

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini88 – 276189ABC transmembrane type-1PROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 ABC transmembrane type-1 domain.PROSITE-ProRule annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG1173.
    HOGENOMiHOG000171368.
    KOiK02034.
    OMAiRVETTIM.
    OrthoDBiEOG6T7N3V.

    Family and domain databases

    Gene3Di1.10.3720.10. 1 hit.
    InterProiIPR000515. MetI-like.
    [Graphical view]
    PfamiPF00528. BPD_transp_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF161098. SSF161098. 1 hit.
    PROSITEiPS50928. ABC_TM1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q53192-1 [UniParc]FASTAAdd to Basket

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    MALTTSRASG SPRIQTHTVV RIAKRHPLVL LGGGILLLLI LLALAAPLYS    50
    GDPLVMDPFK RLQQPSASMW FGTDNLGRDV FARTIYGARI SLIVGLLSAV 100
    CAAVCGLLIG VIAGYSRTFD NIIMRVMDGL MSIPTFLLAI ALLSLTGPGI 150
    GILIVAIAIP ETPAVTRLVR SVVLSVRSRP YVEAALCGGA RLPRVLWRHI 200
    LPSTIPPLMV QSATVCASAI MTEAGLSFIG VGVPSEIPSW GNMIANSRLF 250
    LAIAPLTIFA PGLCLAVTVL AVNLLGDGLR DMFDPRSKRR R 291
    Length:291
    Mass (Da):30,910
    Last modified:November 1, 1996 - v1
    Checksum:iCD82B7EBB91146E5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z68203 Genomic DNA. Translation: CAA92399.1.
    U00090 Genomic DNA. Translation: AAB91870.1.
    RefSeqiNP_444083.1. NC_000914.2.
    WP_010875180.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91870; AAB91870; NGR_a01420.
    GeneIDi962464.
    KEGGirhi:NGR_a01420.
    PATRICi32300985. VBIRhiSp122450_0128.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z68203 Genomic DNA. Translation: CAA92399.1 .
    U00090 Genomic DNA. Translation: AAB91870.1 .
    RefSeqi NP_444083.1. NC_000914.2.
    WP_010875180.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali Q53192.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a01420.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91870 ; AAB91870 ; NGR_a01420 .
    GeneIDi 962464.
    KEGGi rhi:NGR_a01420.
    PATRICi 32300985. VBIRhiSp122450_0128.

    Phylogenomic databases

    eggNOGi COG1173.
    HOGENOMi HOG000171368.
    KOi K02034.
    OMAi RVETTIM.
    OrthoDBi EOG6T7N3V.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6193-MONOMER.

    Family and domain databases

    Gene3Di 1.10.3720.10. 1 hit.
    InterProi IPR000515. MetI-like.
    [Graphical view ]
    Pfami PF00528. BPD_transp_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF161098. SSF161098. 1 hit.
    PROSITEi PS50928. ABC_TM1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequencing the 500-kb GC-rich symbiotic replicon of Rhizobium sp. NGR234 using dye terminators and a thermostable 'sequenase': a beginning."
      Freiberg C., Perret X., Broughton W.J., Rosenthal A.
      Genome Res. 6:590-600(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4TQ_RHISN
    AccessioniPrimary (citable) accession number: Q53192
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3