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Protein

Probable peptide ABC transporter permease protein y4tQ

Gene

NGR_a01420

Organism
Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane.

GO - Biological processi

Keywordsi

Biological processAmino-acid transport, Transport

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6177-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Probable peptide ABC transporter permease protein y4tQ
Gene namesi
Ordered Locus Names:NGR_a01420
ORF Names:y4tQ
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiSinorhizobium fredii (strain NBRC 101917 / NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
Proteomesi
  • UP000001054 Componenti: Plasmid sym pNGR234a

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei28 – 48HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei92 – 112HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei137 – 157HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei213 – 233HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei249 – 269HelicalPROSITE-ProRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000603001 – 291Probable peptide ABC transporter permease protein y4tQAdd BLAST291

Proteomic databases

PRIDEiQ53192

Structurei

3D structure databases

ProteinModelPortaliQ53192
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini88 – 276ABC transmembrane type-1PROSITE-ProRule annotationAdd BLAST189

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000171368
KOiK02034
OMAiWFRSLDG
OrthoDBiPOG091H0048

Family and domain databases

CDDicd06261 TM_PBP2, 1 hit
Gene3Di1.10.3720.10, 1 hit
InterProiView protein in InterPro
IPR000515 MetI-like
IPR035906 MetI-like_sf
PfamiView protein in Pfam
PF00528 BPD_transp_1, 1 hit
SUPFAMiSSF161098 SSF161098, 1 hit
PROSITEiView protein in PROSITE
PS50928 ABC_TM1, 1 hit

Sequencei

Sequence statusi: Complete.

Q53192-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALTTSRASG SPRIQTHTVV RIAKRHPLVL LGGGILLLLI LLALAAPLYS
60 70 80 90 100
GDPLVMDPFK RLQQPSASMW FGTDNLGRDV FARTIYGARI SLIVGLLSAV
110 120 130 140 150
CAAVCGLLIG VIAGYSRTFD NIIMRVMDGL MSIPTFLLAI ALLSLTGPGI
160 170 180 190 200
GILIVAIAIP ETPAVTRLVR SVVLSVRSRP YVEAALCGGA RLPRVLWRHI
210 220 230 240 250
LPSTIPPLMV QSATVCASAI MTEAGLSFIG VGVPSEIPSW GNMIANSRLF
260 270 280 290
LAIAPLTIFA PGLCLAVTVL AVNLLGDGLR DMFDPRSKRR R
Length:291
Mass (Da):30,910
Last modified:November 1, 1996 - v1
Checksum:iCD82B7EBB91146E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z68203 Genomic DNA Translation: CAA92399.1
U00090 Genomic DNA Translation: AAB91870.1
RefSeqiNP_444083.1, NC_000914.2
WP_010875180.1, NC_000914.2

Genome annotation databases

EnsemblBacteriaiAAB91870; AAB91870; NGR_a01420
GeneIDi962464
KEGGirhi:NGR_a01420
PATRICifig|394.7.peg.128

Similar proteinsi

Entry informationi

Entry nameiY4TQ_SINFN
AccessioniPrimary (citable) accession number: Q53192
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 99 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

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