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Protein
Submitted name:

AsnC family transcriptional regulator

Gene

QV65_20920

Organism
Rhodococcus erythropolis (Arthrobacter picolinophilus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AsnC family transcriptional regulatorImported
Submitted name:
Orf1; putative regulatory protein of AsnC-Lrp familyImported
Gene namesi
ORF Names:QV65_20920Imported, XU06_18810Imported
OrganismiRhodococcus erythropolis (Arthrobacter picolinophilus)Imported
Taxonomic identifieri1833 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000031966 Componenti: Unassembled WGS sequence
  • UP000033069 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi234621.RER_40190.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini4 – 6562HTH asnC-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 3 HTH asnC-type DNA-binding domains.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108WV3. Bacteria.
ENOG4111M5U. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.920. 1 hit.
InterProiIPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01037. AsnC_trans_reg. 1 hit.
PF13404. HTH_AsnC-type. 1 hit.
[Graphical view]
PRINTSiPR00033. HTHASNC.
SMARTiSM00344. HTH_ASNC. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiPS50956. HTH_ASNC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q53106-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSIDKLDVQ LLGLLSKDSR MSVAELANSL GVARNTVQSR MKRMESNGLL
60 70 80 90 100
TGFRPNLNLP EVGIPIQAFV GLELEQGKIS AVARSLTELP EVIEIHATTG
110 120 130 140 150
REDLLVRVAT STHAALQKLA EQIVSLPGVT HSTTTIALTN PLPYRIQPLL
160 170
EHLTNDAGWG RSTAFPRQQD
Length:170
Mass (Da):18,498
Last modified:November 1, 1996 - v1
Checksum:i501D3FBB02E45E4A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U42216 Genomic DNA. Translation: AAC45745.1.
CP011295 Genomic DNA. Translation: AKD98524.1.
JWJL01000344 Genomic DNA. Translation: KIM15694.1.
RefSeqiWP_003941343.1. NZ_LDPN01000070.1.

Genome annotation databases

EnsemblBacteriaiAKD98524; AKD98524; XU06_18810.
KIM15694; KIM15694; QV65_20920.
KLN70917; KLN70917; ABM90_14590.
GeneIDi7710847.
KEGGireb:XU06_18810.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U42216 Genomic DNA. Translation: AAC45745.1.
CP011295 Genomic DNA. Translation: AKD98524.1.
JWJL01000344 Genomic DNA. Translation: KIM15694.1.
RefSeqiWP_003941343.1. NZ_LDPN01000070.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi234621.RER_40190.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAKD98524; AKD98524; XU06_18810.
KIM15694; KIM15694; QV65_20920.
KLN70917; KLN70917; ABM90_14590.
GeneIDi7710847.
KEGGireb:XU06_18810.

Phylogenomic databases

eggNOGiENOG4108WV3. Bacteria.
ENOG4111M5U. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.920. 1 hit.
InterProiIPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01037. AsnC_trans_reg. 1 hit.
PF13404. HTH_AsnC-type. 1 hit.
[Graphical view]
PRINTSiPR00033. HTHASNC.
SMARTiSM00344. HTH_ASNC. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiPS50956. HTH_ASNC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ53106_RHOER
AccessioniPrimary (citable) accession number: Q53106
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.