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Protein
Submitted name:

AsnC family transcriptional regulator

Gene

asnC_2

Organism
Rhodococcus erythropolis (Arthrobacter picolinophilus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi23 – 42H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AsnC family transcriptional regulatorImported
Submitted name:
Orf1; putative regulatory protein of AsnC-Lrp familyImported
Submitted name:
Regulatory protein AsnCImported
Gene namesi
Name:asnC_2Imported
ORF Names:QV65_20920Imported, RERY_30190Imported, XU06_18810Imported
OrganismiRhodococcus erythropolis (Arthrobacter picolinophilus)Imported
Taxonomic identifieri1833 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000176698 Componenti: Unassembled WGS sequence
  • UP000031966 Componenti: Unassembled WGS sequence
  • UP000033069 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi234621.RER_40190.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 65HTH asnC-type DNA-bindingInterPro annotationAdd BLAST62

Phylogenomic databases

eggNOGiENOG4108WV3. Bacteria.
ENOG4111M5U. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.920. 1 hit.
InterProiView protein in InterPro
IPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF01037. AsnC_trans_reg. 1 hit.
PF13404. HTH_AsnC-type. 1 hit.
PRINTSiPR00033. HTHASNC.
SMARTiView protein in SMART
SM00344. HTH_ASNC. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiView protein in PROSITE
PS50956. HTH_ASNC_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q53106-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSIDKLDVQ LLGLLSKDSR MSVAELANSL GVARNTVQSR MKRMESNGLL
60 70 80 90 100
TGFRPNLNLP EVGIPIQAFV GLELEQGKIS AVARSLTELP EVIEIHATTG
110 120 130 140 150
REDLLVRVAT STHAALQKLA EQIVSLPGVT HSTTTIALTN PLPYRIQPLL
160 170
EHLTNDAGWG RSTAFPRQQD
Length:170
Mass (Da):18,498
Last modified:November 1, 1996 - v1
Checksum:i501D3FBB02E45E4A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U42216 Genomic DNA. Translation: AAC45745.1.
CP011295 Genomic DNA. Translation: AKD98524.1.
JWJL01000344 Genomic DNA. Translation: KIM15694.1.
LYPG01000052 Genomic DNA. Translation: OFV76280.1.
RefSeqiWP_003941343.1. NZ_MLKO01000011.1.

Genome annotation databases

EnsemblBacteriaiAKD98524; AKD98524; XU06_18810.
KIM15694; KIM15694; QV65_20920.
KLN70917; KLN70917; ABM90_14590.
GeneIDi7710847.
KEGGireb:XU06_18810.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U42216 Genomic DNA. Translation: AAC45745.1.
CP011295 Genomic DNA. Translation: AKD98524.1.
JWJL01000344 Genomic DNA. Translation: KIM15694.1.
LYPG01000052 Genomic DNA. Translation: OFV76280.1.
RefSeqiWP_003941343.1. NZ_MLKO01000011.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi234621.RER_40190.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAKD98524; AKD98524; XU06_18810.
KIM15694; KIM15694; QV65_20920.
KLN70917; KLN70917; ABM90_14590.
GeneIDi7710847.
KEGGireb:XU06_18810.

Phylogenomic databases

eggNOGiENOG4108WV3. Bacteria.
ENOG4111M5U. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.920. 1 hit.
InterProiView protein in InterPro
IPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF01037. AsnC_trans_reg. 1 hit.
PF13404. HTH_AsnC-type. 1 hit.
PRINTSiPR00033. HTHASNC.
SMARTiView protein in SMART
SM00344. HTH_ASNC. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiView protein in PROSITE
PS50956. HTH_ASNC_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ53106_RHOER
AccessioniPrimary (citable) accession number: Q53106
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: February 15, 2017
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.