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Protein
Submitted name:

Nodulation D

Gene

NodD

Organism
Rhizobium sp.
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi23 – 42H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Nodulation DImported
Gene namesi
Name:NodDImported
OrganismiRhizobium sp.Imported
Taxonomic identifieri391 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Structurei

3D structure databases

ProteinModelPortaliQ53061.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 63HTH lysR-typeInterPro annotationAdd BLAST58

Family and domain databases

CDDicd08462. PBP2_NodD. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR005119. LysR_subst-bd.
IPR037416. NodD_PBP2.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS50931. HTH_LYSR. 1 hit.

Sequencei

Sequence statusi: Complete.

Q53061-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFKGLDLNL LVALDALMAE RNLTAAARSI NLSQPAMSAA VARLRTYFDD
60 70 80 90 100
ELFTMIGREL IPTPRAERLA PAVRETLLHV QLSIIAGEPF NPAQSDRRFR
110 120 130 140 150
IILSDYATLV FFEKIVERAS REAPAVSFEF LPLADDYGDL LRRGDIDLLI
160 170 180 190 200
LPDMFMSDSH PQAKLFDEVH VCIGCRSNKQ LSDPLTFESY MSMGHVAVKF
210 220 230 240 250
GNTRQPSIEE WYLREHGLKR RIEVVVQGFS MIAPMVSGTE RIGTMPLRLA
260 270 280 290 300
QHFAKAIPLR IVELPLPLPP FTEAVQWPAL HNNDPASLWM REMLVQEASR

MGLRREFT
Length:308
Mass (Da):34,947
Last modified:November 1, 1996 - v1
Checksum:i832007D12B9082AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U16154 Genomic DNA. Translation: AAA85282.1.

Similar proteinsi

Entry informationi

Entry nameiQ53061_RHISP
AccessioniPrimary (citable) accession number: Q53061
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: January 31, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)