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Protein

General L-amino acid transport system permease protein AapM

Gene

aapM

Organism
Rhizobium leguminosarum bv. viciae (strain 3841)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids. Probably responsible for the translocation of the substrate across the membrane.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processAmino-acid transport, Transport

Protein family/group databases

TCDBi3.A.1.3.8 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
General L-amino acid transport system permease protein AapM
Gene namesi
Name:aapM
Ordered Locus Names:RL2202
OrganismiRhizobium leguminosarum bv. viciae (strain 3841)
Taxonomic identifieri216596 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
Proteomesi
  • UP000006575 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei44 – 64HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei117 – 137HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei144 – 164HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei179 – 199HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei220 – 240HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei250 – 270HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei319 – 339HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei347 – 367HelicalPROSITE-ProRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000599381 – 384General L-amino acid transport system permease protein AapMAdd BLAST384

Proteomic databases

PRIDEiQ52814

Interactioni

Protein-protein interaction databases

STRINGi216596.RL2202

Structurei

3D structure databases

ProteinModelPortaliQ52814
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini175 – 364ABC transmembrane type-1PROSITE-ProRule annotationAdd BLAST190

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105DRP Bacteria
COG0765 LUCA
HOGENOMiHOG000125341
KOiK09971
OMAiLVFWVFC
OrthoDBiPOG091H0AU2

Family and domain databases

CDDicd06261 TM_PBP2, 1 hit
Gene3Di1.10.3720.10, 1 hit
InterProiView protein in InterPro
IPR010065 AA_ABC_transptr_permease_3TM
IPR000515 MetI-like
IPR035906 MetI-like_sf
PfamiView protein in Pfam
PF00528 BPD_transp_1, 1 hit
SUPFAMiSSF161098 SSF161098, 1 hit
TIGRFAMsiTIGR01726 HEQRo_perm_3TM, 1 hit
PROSITEiView protein in PROSITE
PS50928 ABC_TM1, 1 hit

Sequencei

Sequence statusi: Complete.

Q52814-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVADKPFVR TSILAAEPPP PGERGAVAWI RRNLLATPKD VILTILALAL
60 70 80 90 100
IAWAVPHLVN WLFIQAVWSG PDRTFCATTL QGGIQPDGWS GACWAFISAK
110 120 130 140 150
YDQFIFGRYP LGERWRPAIV GILFILLLVP MLIPSAPRKG LNAILLFAVL
160 170 180 190 200
PVIAFWLLHG GFGLEVVETP LWGGLMVTLV LSFVGIAVSL PVGILLALGR
210 220 230 240 250
RSRMPVIRML CVTFIEVIRG VPLITVLFMA SVMLPLFLPT GWNVDKLLRA
260 270 280 290 300
LIGVSIFTSA YMAEVIRGGL QAIPKGQFEG ADSLGLGYWQ KTRLIIMPQA
310 320 330 340 350
IKLVIPSIVN TFIGTFKDTS LVTIIGMFDL LGIVKLNFSD ANWASAVTPI
360 370 380
TGLIFAGFIF WLFCFGMSRY SGFMERHLDT GHKR
Length:384
Mass (Da):42,150
Last modified:November 1, 1996 - v1
Checksum:i6D4927918F60872F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X82596 Genomic DNA Translation: CAA57935.1
AM236080 Genomic DNA Translation: CAK07694.1
RefSeqiWP_011651799.1, NC_008380.1

Genome annotation databases

EnsemblBacteriaiCAK07694; CAK07694; RL2202
KEGGirle:RL2202

Similar proteinsi

Entry informationi

Entry nameiAAPM_RHIL3
AccessioniPrimary (citable) accession number: Q52814
Secondary accession number(s): Q1MH73
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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