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Protein

General L-amino acid transport system permease protein AapQ

Gene

aapQ

Organism
Rhizobium leguminosarum bv. viciae (strain 3841)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids. Probably responsible for the translocation of the substrate across the membrane.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Amino-acid transport, Transport

Enzyme and pathway databases

BioCyciRLEG216596:GKE5-2250-MONOMER.

Protein family/group databases

TCDBi3.A.1.3.8. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
General L-amino acid transport system permease protein AapQ
Gene namesi
Name:aapQ
Ordered Locus Names:RL2203
OrganismiRhizobium leguminosarum bv. viciae (strain 3841)
Taxonomic identifieri216596 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
Proteomesi
  • UP000006575 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei29 – 4921HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei100 – 12021HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei142 – 16221HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei188 – 20821HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei225 – 24521HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei264 – 28421HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei340 – 36021HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei367 – 38721HelicalPROSITE-ProRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 400400General L-amino acid transport system permease protein AapQPRO_0000059939Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi216596.RL2203.

Structurei

3D structure databases

ProteinModelPortaliQ52813.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini96 – 388293ABC transmembrane type-1PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 ABC transmembrane type-1 domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105EZ7. Bacteria.
COG4597. LUCA.
HOGENOMiHOG000267553.
KOiK09970.
OMAiSTIYIET.
OrthoDBiPOG091H0AU2.

Family and domain databases

CDDicd06261. TM_PBP2. 1 hit.
Gene3Di1.10.3720.10. 2 hits.
InterProiIPR010065. AA_ABC_transptr_permease_3TM.
IPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 2 hits.
TIGRFAMsiTIGR01726. HEQRo_perm_3TM. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q52813-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTHEAVDTTP LHGTGWSFRS AMYDPKYRSI FYQILTIVIL VGFVWWVAHN
60 70 80 90 100
TAVNLARSNT ASGFGFLRGR AGFEIGQSLI TFSSDSTYAR ALLVGILNTL
110 120 130 140 150
LVAVTGIFTA TIIGFLIGIG RLSRNWLIAK LCTVYVEVFR NIPPLLVIFF
160 170 180 190 200
WYLGVLSVLP QPRESVGLPF SMYLNNRGLA FPKPIFDTGM IAVGIALVIA
210 220 230 240 250
IVASIIIARW AHKRQAATGQ PFHTVWTAIA LIVGLPLLVF VVSGFPLTFD
260 270 280 290 300
VPVAGKFNLT GGSVVGPEFM SLFLALSFYT ASFIAEIVRG GIRGVPKGQS
310 320 330 340 350
EAAGALGLHP SSVTRLVVVP QALRIIIPPL TSQYLNLTKN SSLAIAIGFS
360 370 380 390 400
DLVAVGGTIL NQSGQAIEIV CIWGIVYLSL SILTSLFMNW FNAKMALVER
Length:400
Mass (Da):43,296
Last modified:November 1, 1996 - v1
Checksum:iF1DD1580E3EE287B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X82596 Genomic DNA. Translation: CAA57934.1.
AM236080 Genomic DNA. Translation: CAK07695.1.
RefSeqiWP_011651800.1. NC_008380.1.

Genome annotation databases

EnsemblBacteriaiCAK07695; CAK07695; RL2203.
KEGGirle:RL2203.
PATRICi23141009. VBIRhiLeg32091_3429.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X82596 Genomic DNA. Translation: CAA57934.1.
AM236080 Genomic DNA. Translation: CAK07695.1.
RefSeqiWP_011651800.1. NC_008380.1.

3D structure databases

ProteinModelPortaliQ52813.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216596.RL2203.

Protein family/group databases

TCDBi3.A.1.3.8. the atp-binding cassette (abc) superfamily.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAK07695; CAK07695; RL2203.
KEGGirle:RL2203.
PATRICi23141009. VBIRhiLeg32091_3429.

Phylogenomic databases

eggNOGiENOG4105EZ7. Bacteria.
COG4597. LUCA.
HOGENOMiHOG000267553.
KOiK09970.
OMAiSTIYIET.
OrthoDBiPOG091H0AU2.

Enzyme and pathway databases

BioCyciRLEG216596:GKE5-2250-MONOMER.

Family and domain databases

CDDicd06261. TM_PBP2. 1 hit.
Gene3Di1.10.3720.10. 2 hits.
InterProiIPR010065. AA_ABC_transptr_permease_3TM.
IPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 2 hits.
TIGRFAMsiTIGR01726. HEQRo_perm_3TM. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiAAPQ_RHIL3
AccessioniPrimary (citable) accession number: Q52813
Secondary accession number(s): Q1MH72
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.