Unreviewed, UniProtKB/TrEMBL Q52753 (Q52753_RUMFL)

Names and origin

Protein names

Submitted name:
    XynB EMBL CAA84537.1

Gene names

Name:

xynB EMBL CAA84537.1

Organism

Ruminococcus flavefaciens EMBL CAA84537.1

Taxonomic identifier

1265 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Ruminococcaceae › Ruminococcus

Protein attributes

Sequence length	781 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

Ontologies

Keywords
Biological process	Xylan degradation EMBL CAA84537.1
Domain	Signal
Gene Ontology (GO)
Biological process	lipid metabolic process Inferred from electronic annotation. Source: InterPro xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	hydrolase activity, acting on ester bonds Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 28	28	Potential EMBL CAA84537.1
	Chain	29 – 781	753	Potential EMBL CAA84537.1		PRO_5000147535

Sequences

	Sequence		Length	Mass (Da)
	Q52753-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: BBA4E15A1D238CA2	FASTA	781	84,491
	10 20 30 40 50 60 MRFKALKKIL SGTVSALMIA VSMPTSFSVH ADDQQDKGNV GGYDWEMWNQ NYTGTVSMKP 70 80 90 100 110 120 SAGSFTCSWS GIENFLARMG KNYDSQKINY KALGDIVLSY DVEYTPRGNS YMCIYGWTRN 130 140 150 160 170 180 PLMEYYIVEG WGDWEPPGND GVDNFGTATI DGRTYKIRKS MRYNQPSIEG TKTFPQYWSV 190 200 210 220 230 240 RTSSGSRNNT TNYMKDSVTV SAHFDAWSKA GLDMSGTLYE VSLNIEGYRS NGSANVKSIT 250 260 270 280 290 300 VGGDPPPPKE PVKADENGYY LKENFESGTG DWGARGSAKV ESSSTGYDGS KGIYVSGRTN 310 320 330 340 350 360 NWNGASIKLD TSTFVPGETY SLGAAVMQDS EASVDLKLTL QYTDANGKDN YDEVKTVSAA 370 380 390 400 410 420 KGQWTDLSNA SYTIPADASG LELYIEAPDS LTDFYVDGAY AGVKGTKPLL SIDPSQQPVI 430 440 450 460 470 480 TDPITTQPPS SNVDKNKTIK ILPAGDSITN GDGEQGGYRK YLFDALSKLG YTKIDMVGPN 490 500 510 520 530 540 RDRSNTANGI TYDTDHAGFS GYQIKEVPSW GQQQGGKGSL YNELKNNDVV KKTQPDIILL 550 560 570 580 590 600 MIGTNDLTAN RSMDACTADL RSMLDYMLGD MPSGGMIFLC SVPEHTAYGG NTQKIANYNN 610 620 630 640 650 660 TVKSVAEEYA NKGKNVRFAD VHGCLDGMND ISSQDHLHPN GTGYKKMGNF FAGVIDDYIT 670 680 690 700 710 720 SLAPPVTTTT STTTTTTTTT TTTTTTTTAT TTTTTTTTAE PELTVKKAGD ANDDGNLDLA 730 740 750 760 770 780 DAILIMQALA NPNKYGLEGT AEKHLTEQGK VNADVDKSTK GLTADDALMI QEFLIGKVAS L

References

[1]

"Identification of non-catalytic conserved regions in xylanases encoded by the xynB and xynD genes of the cellulolytic rumen anaerobe Ruminococcus flavefaciens." Zhang J.X., Martin J., Flint H.J. Mol. Gen. Genet. 245:260-264(1994) [PubMed: 7816035] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 17 EMBL CAA84537.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	Z35226 Genomic DNA. Translation: CAA84537.1.
PIR	S51592.
3D structure databases
HSSP	HSSP built from PDB template 1F5J based on UniProtKB P77853.
ModBase	Search...
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. GH11. Glycoside Hydrolase Family 11.
Family and domain databases
InterPro	IPR003305. CenC_carb_bd. IPR013831. Esterase_SGNH_hydro-type_subgr. IPR001137. Glyco_hydro_11. IPR013319. Glyco_hydro_11/12_cat. IPR018208. Glyco_hydro_11_AS. IPR001087. Lipase_GDSL. [Graphical view]
Gene3D	G3DSA:3.40.50.1110. Esterase_SGNH_hydro-type_subgr. 1 hit. G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 1 hit. PF00457. Glyco_hydro_11. 1 hit. PF00657. Lipase_GDSL. 1 hit. [Graphical view]
PRINTS	PR00911. GLHYDRLASE11.
PROSITE	PS00776. GLYCOSYL_HYDROL_F11_1. 1 hit. PS00777. GLYCOSYL_HYDROL_F11_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q52753_RUMFL

Accession

Primary (citable) accession number: Q52753

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	April 14, 2009
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)