Q52644 (Q52644_RUMAL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
XynA EMBL AAA85198.1

Gene names

Name:

xynA EMBL AAA85198.1

Organism

Ruminococcus albus EMBL AAA85198.1

Taxonomic identifier

1264 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Ruminococcaceae › Ruminococcus

Protein attributes

Sequence length	680 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 11 (cellulase G) family. RuleBase RU003433

Ontologies

Keywords
Biological process	Xylan degradation RuleBase RU003433
Molecular function	Glycosidase RuleBase RU003433 Hydrolase
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q52644 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 8BEC0A50C5C928CD	FASTA	680	74,469
	10 20 30 40 50 60 MRNNFKMRVM AGVAAVICLA GVLGSCGNSS DKDSSSKKSA DSAKADSNKD SKNGQVFTKN 70 80 90 100 110 120 ARGTSDGYDY ELWKDKGDTE MTINEGGTFS CKWSNINNAL FRRGKKFDCT KTYKELGNIS 130 140 150 160 170 180 VKYGVDYQPD GNSYMCVYGW TIDPLVEFYI VESWGSWRPP GAAESLGTVT VDGGTYDIYK 190 200 210 220 230 240 TTRYEQPSID GTKTFDQYWS VRQDKPTGDG TKIEGTISIS KHFDAWEQVG LTLGNMYEVA 250 260 270 280 290 300 LNIEGYQSNG QATIYENELT VDGNYSADPA PEVKKSSDEK EPEPQSTNGA GLFTADFESD 310 320 330 340 350 360 ECGWTSRGSA AVAQNTDEAS EGRGSLFVSG RTDNWNGASI ELDSGTFKQG STYSFKTDAM 370 380 390 400 410 420 QKSGKEATLK FTMQYTAADG DHYDQIAQQT APDGEWITLE GDYTIPDDAT KLVLYVESPD 430 440 450 460 470 480 SLTDFYIDNA SATGDGSEPA KTADDKKEEA EYTFSDPVAV SNTADISWID KDKPMVAIAF 490 500 510 520 530 540 DDGASAAKKG DPAYRIIDTM ADNGFHATFF YIGSQIKTEE QVKYAHEKGM ETANHTMTHP 550 560 570 580 590 600 YLSKLKPAEI RDEYEKCREK LKGIIGEEPS ALMRLPYLDG GGDTTRTLND VALISCSVDT 610 620 630 640 650 660 KDWNKATSDK IVDTIKKAKD NGSLNGAIVL CHENYAATAE AMEEIVPWLK DEGWQVVTVS 670 680 ELFAANGKEL MGGKIYSKLS

References

[1]	"Molecular cloning, nucleotide sequence and characteristics of a xylanase gene (xynA) from Ruminococcus albus 7." Nakamura M., Nagamine T., Takenaka A., Aminov R.I., Ogata K., Tajima K., Matsui H., Benno Y., Itabashi H. Anim. Sci. J. 73:347-352(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: 7 EMBL AAA85198.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U43089 Genomic DNA. Translation: AAA85198.1.
3D structure databases
HSSP	HSSP built from PDB template 1F5J based on UniProtKB P77853.
ProteinModelPortal	Q52644.
SMR	Q52644. Positions 58-263.
ModBase	Search...
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. GH11. Glycoside Hydrolase Family 11.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR003305. CenC_carb-bd. IPR008985. ConA-like_lec_gl. IPR008979. Galactose-bd-like. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR001137. Glyco_hydro_11. IPR013319. Glyco_hydro_11/12_cat. IPR018208. Glyco_hydro_11_AS. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit. G3DSA:3.20.20.370. Polysac_deacetylase. 1 hit.
Pfam	PF02018. CBM_4_9. 1 hit. PF00457. Glyco_hydro_11. 1 hit. PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
PRINTS	PR00911. GLHYDRLASE11.
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF49785. Gal_bind_like. 1 hit. SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
PROSITE	PS00776. GLYCOSYL_HYDROL_F11_1. 1 hit. PS00777. GLYCOSYL_HYDROL_F11_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q52644_RUMAL

Accession

Primary (citable) accession number: Q52644

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	September 21, 2011
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)