Unreviewed, UniProtKB/TrEMBL Q52644 (Q52644_RUMAL)

Names and origin

Protein names

Submitted name:
    XynA EMBL AAA85198.1

Gene names

Name:

xynA EMBL AAA85198.1

Organism

Ruminococcus albus EMBL AAA85198.1

Taxonomic identifier

1264 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Ruminococcaceae › Ruminococcus

Protein attributes

Sequence length	680 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 11 (cellulase G) family. RuleBase RU003433V0

Ontologies

Keywords
Biological process	Xylan degradation RuleBase RU003433V0
Molecular function	Glycosidase RuleBase RU003433V0 Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q52644-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 8BEC0A50C5C928CD	FASTA	680	74,469
	10 20 30 40 50 60 MRNNFKMRVM AGVAAVICLA GVLGSCGNSS DKDSSSKKSA DSAKADSNKD SKNGQVFTKN 70 80 90 100 110 120 ARGTSDGYDY ELWKDKGDTE MTINEGGTFS CKWSNINNAL FRRGKKFDCT KTYKELGNIS 130 140 150 160 170 180 VKYGVDYQPD GNSYMCVYGW TIDPLVEFYI VESWGSWRPP GAAESLGTVT VDGGTYDIYK 190 200 210 220 230 240 TTRYEQPSID GTKTFDQYWS VRQDKPTGDG TKIEGTISIS KHFDAWEQVG LTLGNMYEVA 250 260 270 280 290 300 LNIEGYQSNG QATIYENELT VDGNYSADPA PEVKKSSDEK EPEPQSTNGA GLFTADFESD 310 320 330 340 350 360 ECGWTSRGSA AVAQNTDEAS EGRGSLFVSG RTDNWNGASI ELDSGTFKQG STYSFKTDAM 370 380 390 400 410 420 QKSGKEATLK FTMQYTAADG DHYDQIAQQT APDGEWITLE GDYTIPDDAT KLVLYVESPD 430 440 450 460 470 480 SLTDFYIDNA SATGDGSEPA KTADDKKEEA EYTFSDPVAV SNTADISWID KDKPMVAIAF 490 500 510 520 530 540 DDGASAAKKG DPAYRIIDTM ADNGFHATFF YIGSQIKTEE QVKYAHEKGM ETANHTMTHP 550 560 570 580 590 600 YLSKLKPAEI RDEYEKCREK LKGIIGEEPS ALMRLPYLDG GGDTTRTLND VALISCSVDT 610 620 630 640 650 660 KDWNKATSDK IVDTIKKAKD NGSLNGAIVL CHENYAATAE AMEEIVPWLK DEGWQVVTVS 670 680 ELFAANGKEL MGGKIYSKLS

References

[1]

"Molecular cloning, nucleotide sequence and characteristics of a xylanase gene (xynA) from Ruminococcus albus 7." Nakamura M., Nagamine T., Takenaka A., Aminov R.I., Ogata K., Tajima K., Matsui H., Benno Y., Itabashi H. Anim. Sci. J. 73:347-352(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: 7 EMBL AAA85198.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U43089 Genomic DNA. Translation: AAA85198.1.
3D structure databases
HSSP	HSSP built from PDB template 1F5J based on UniProtKB P77853.
ModBase	Search...
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. GH11. Glycoside Hydrolase Family 11.
Family and domain databases
InterPro	IPR003305. CenC_carb_bd. IPR002194. Chaperonin_TCP-1_CS. IPR001137. Glyco_hydro_11. IPR013319. Glyco_hydro_11/12_cat. IPR018208. Glyco_hydro_11_AS. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit. G3DSA:3.20.20.370. Polysac_deacetylase. 1 hit.
Pfam	PF02018. CBM_4_9. 1 hit. PF00457. Glyco_hydro_11. 1 hit. PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
PRINTS	PR00911. GLHYDRLASE11.
PROSITE	PS00776. GLYCOSYL_HYDROL_F11_1. 1 hit. PS00777. GLYCOSYL_HYDROL_F11_2. 1 hit. PS00995. TCP1_3. 1 hit. Uncertain. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q52644_RUMAL

Accession

Primary (citable) accession number: Q52644

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	April 14, 2009
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)