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Protein
Submitted name:

Rom

Gene

rom

Organism
Proteus vulgaris
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
RomImported
Gene namesi
Name:romImported
Encoded oniPlasmid pPvu1Imported
OrganismiProteus vulgarisImported
Taxonomic identifieri585 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeProteus

Structurei

3D structure databases

ProteinModelPortaliQ52624.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

InterProiIPR000769. Regulatory_Rop.
[Graphical view]
PfamiPF01815. Rop. 1 hit.
[Graphical view]
PIRSFiPIRSF003229. Rop_reg. 1 hit.
PRINTSiPR00835. ROPREGULATRY.
SUPFAMiSSF47380. SSF47380. 1 hit.

Sequencei

Sequence statusi: Complete.

Q52624-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKQEKAVVN MAKFLQAQSL LLLLEKLNEL NSDKLDAETN LCEELHEHAE
60
SLHQQLSAKV GGELALLQ
Length:68
Mass (Da):7,599
Last modified:March 1, 2001 - v2
Checksum:iF8C3FB8A6001ACBD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF305615 Genomic DNA. Translation: AAG42420.1.
RefSeqiNP_072084.1. NC_002632.1.
WP_010904460.1. NC_002632.1.

Genome annotation databases

GeneIDi1238798.
KEGGipg:1238798.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF305615 Genomic DNA. Translation: AAG42420.1.
RefSeqiNP_072084.1. NC_002632.1.
WP_010904460.1. NC_002632.1.

3D structure databases

ProteinModelPortaliQ52624.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1238798.
KEGGipg:1238798.

Family and domain databases

InterProiIPR000769. Regulatory_Rop.
[Graphical view]
PfamiPF01815. Rop. 1 hit.
[Graphical view]
PIRSFiPIRSF003229. Rop_reg. 1 hit.
PRINTSiPR00835. ROPREGULATRY.
SUPFAMiSSF47380. SSF47380. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1
  2. "Cloning of a restriction-modification system from Proteus vulgaris and its use in analyzing a methylase-sensitive phenotype in Escherichia coli."
    Blumenthal R.M., Gregory S.A., Cooperider J.S.
    J. Bacteriol. 164:501-509(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1
  3. "Interaction of AluI, Cfr6I and PvuII restriction-modification enzymes with substrates containing either N4-methylcytosine or 5-methylcytosine."
    Butkus V., Klimasauskas S., Petrauskiene L., Maneliene Z., Lebionka A., Janulaitis A.
    Biochim. Biophys. Acta 909:201-207(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1
  4. "Complete nucleotide sequence of the PvuII restriction enzyme gene from Proteus vulgaris."
    Athanasiadis A., Gregoriu M., Thanos D., Kokkinidis M., Papamatheakis J.
    Nucleic Acids Res. 18:6434-6434(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1
  5. "A family of regulatory genes associated with type II restriction-modification systems."
    Tao T., Bourne J.C., Blumenthal R.M.
    J. Bacteriol. 173:1367-1375(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1
  6. "Sequence and characterization of pvuIIR, the PvuII endonuclease gene, and of pvuIIC, its regulatory gene."
    Tao T., Blumenthal R.M.
    J. Bacteriol. 174:3395-3398(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1
  7. "Structure of PvuII endonuclease with cognate DNA."
    Cheng X., Balendiran K., Schildkraut I., Anderson J.E.
    EMBO J. 13:3927-3935(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1
  8. "Crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV."
    Athanasiadis A., Vlassi M., Kotsifaki D., Tucker P.A., Wilson K.S., Kokkinidis M.
    Nat. Struct. Biol. 1:469-475(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1
  9. "Characterization of pPvu1, the autonomous plasmid from Proteus vulgaris that carries the genes of the PvuII restriction-modification system."
    Calvin Koons M.D., Blumenthal R.M.
    Gene 157:73-79(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1
  10. "Gene pvuIIW: a possible modulator of PvuII endonuclease subunit association."
    Adams G.M., Blumenthal R.M.
    Gene 157:193-199(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1
  11. "Mobility of restriction-modification system revealed by its genetic contexts in two hosts."
    Blumenthal R.M., Naderer M.A., Brust J.L.
    Submitted (SEP-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC13315Imported.
    Plasmid: pPvu1

Entry informationi

Entry nameiQ52624_PROVU
AccessioniPrimary (citable) accession number: Q52624
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: March 1, 2001
Last modified: April 1, 2015
This is version 50 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

PlasmidImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.