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Protein
Submitted name:

Regulatory protein bphR

Gene

bphR

Organism
Pseudomonas sp.
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Regulatory protein bphRImported
Gene namesi
Name:bphRImported
OrganismiPseudomonas sp.Imported
Taxonomic identifieri306 [NCBI]
Taxonomic lineageiBacteriaProteobacteria

Structurei

3D structure databases

ProteinModelPortaliQ52443.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 5858HTH lysR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.UniRule annotation

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q52443-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELGHLRYFL AVAEELHFAR AAERLHIEQS PLSRAIKELE EELGVVLFAR
60 70 80 90 100
TTRTTRLTCA GKLFLEHVRR VFAALEQARE SVKAAANGFH GQLRVALSDG
110 120 130 140 150
ITRARLPALL ALCRQEEPEV EIRFFEVPLS QQIKGLHDDL YDVGFAQSED
160 170 180 190 200
VGDGIVTIPA WSDALMVAVP RRHTLLAQKR ISLEELLRYP LVLSDPQVCE
210 220 230 240 250
GHARHVDRVL RRLDMEPLVA ERVASCDLMM VLVSAGYALG LAGASHIAAS
260 270 280 290 300
RESGVVARPL ASRVPPLTTY LLHLGGDPSD ELARFIERVQ AIDSPETPRP
310
MRGHNPDPPQ ELMQ
Length:314
Mass (Da):34,883
Last modified:November 1, 1996 - v1
Checksum:iBC6BADA93743E156
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38633 Genomic DNA. Translation: BAA07613.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38633 Genomic DNA. Translation: BAA07613.1.

3D structure databases

ProteinModelPortaliQ52443.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ52443_PSESP
AccessioniPrimary (citable) accession number: Q52443
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: February 17, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.