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Protein

Transport ATP-binding protein AarD

Gene

aarD

Organism
Providencia stuartii
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Somehow involved in the cytochrome D branch of aerobic respiration. Seems to be a component of a transport system (By similarity).By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi383 – 3908ATPPROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Transport ATP-binding protein AarD
Gene namesi
Name:aarD
OrganismiProvidencia stuartii
Taxonomic identifieri588 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeProvidencia

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei29 – 4921HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei62 – 8221HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei149 – 16921HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei170 – 19021HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei250 – 27021HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei276 – 29621HelicalPROSITE-ProRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 588588Transport ATP-binding protein AarDPRO_0000091919Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ52402.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini24 – 316293ABC transmembrane type-1PROSITE-ProRule annotationAdd
BLAST
Domaini350 – 583234ABC transporterPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated
Contains 1 ABC transmembrane type-1 domain.PROSITE-ProRule annotation
Contains 1 ABC transporter domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR014216. ABC_transptr_CydD.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
TIGRFAMsiTIGR02857. CydD. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q52402-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKTRQTELV RWLKQHSTSA KRWLRISMLL GVVSGLLIIA QAWFLAVILQ
60 70 80 90 100
ALIMEHTPRE QLLTPFILLL AVFVLRALLT VIRERVGFRC GQVVRQEVRN
110 120 130 140 150
MVLNKLQALG PVWVKGKPAG SWATIVLEQI EDMQEYYSRY LPQMYLAGII
160 170 180 190 200
PIMILIAIFP FNWAAALILF ATAPLIPIFM ALVGLGAADA NRRNFVALGR
210 220 230 240 250
LSGSFLDRLR GLDTLRLFFR EKAEVQQIRE STEDFRSRTM EVLRMAFLSS
260 270 280 290 300
GVLEFFASIS IAIVAVYFGF SYLGELNFGS YGLPVTMFAG FLALILSPEF
310 320 330 340 350
FQPLRDLGTY YHAKAQAVGA AESLVTLLES DGEQKTETGD KTPQDKPIQI
360 370 380 390 400
EANKLEIYSH DGQRLVGPLD FTIEPQQRIA VFGQSGAGKS SLLNLLLGFL
410 420 430 440 450
PYKGSIKING DELKELCPDK WRALIGWVGQ NPHLPEQTLI ENICLGKPTA
460 470 480 490 500
SEAEIQQAID DAYVSEFLPM LPDGLNTRLG DYAARLSVGQ AQRVAVARTL
510 520 530 540 550
LKPSRILLLD EPAASLDAHS EKRVMHTLNQ LAQQQTTIMV THLLEETVNY
560 570 580
DQIWVMANGQ IIQRGHYAQL SQSEGPFARL LAHRSEEL
Length:588
Mass (Da):65,778
Last modified:November 1, 1996 - v1
Checksum:i3CCE18DDA53B7D36
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U30383 Genomic DNA. Translation: AAB18930.1.
PIRiS70900.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U30383 Genomic DNA. Translation: AAB18930.1.
PIRiS70900.

3D structure databases

ProteinModelPortaliQ52402.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR014216. ABC_transptr_CydD.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
TIGRFAMsiTIGR02857. CydD. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "aarD, a Providencia stuartii homologue of cydD: role in 2'-N-acetyltransferase expression, cell morphology and growth in the presence of an extracellular factor."
    Macinga D.R., Rather P.N.
    Mol. Microbiol. 19:511-520(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: PR50.

Entry informationi

Entry nameiAARD_PROST
AccessioniPrimary (citable) accession number: Q52402
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1996
Last modified: January 7, 2015
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.