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Protein

Beta-xylanase

Gene
N/A
Organism
Prevotella ruminicola (Bacteroides ruminicola)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
OrganismiPrevotella ruminicola (Bacteroides ruminicola)Imported
Taxonomic identifieri839 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPrevotellaceaePrevotella

Interactioni

Protein-protein interaction databases

STRINGi264731.PRU_2739.

Structurei

3D structure databases

ProteinModelPortaliQ52307.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini412 – 704GH10 (glycosyl hydrolase family 10)InterPro annotationAdd BLAST293

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 2 hits.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Q52307-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRNISNIIC GVVAVCGLAS CADTDMINIF KDKTKNLKDY EYLNDYDALK
60 70 80 90 100
TFSNPKASPN FKLGVALEAD DYNANGLVTR LANANFMELT AGNAMKMASC
110 120 130 140 150
VDENGNLNFE NVQAFVNNAE ANGVSVYGHT LAWHAQQPLK WLEKLLKDKE
160 170 180 190 200
LDIDPNAKLE KEDYSGDFVG MSKFPYFVMG YEPSIVNGCL HSENPGSWYQ
210 220 230 240 250
YFIADGISIP ADGNYTAIVK VKGSVANDGL TLNCGWGWGS GESASGKLKI
260 270 280 290 300
TTDWTEQKVD FAGIPGGKKC NLVLQPGSYD GTLDIQTVRL VHYESPAIEV
310 320 330 340 350
AVNDYDYSFK DVSKFPYYVM GYEPTIVNGC LHSEDPGSWY QYFIADNIPH
360 370 380 390 400
PIEGTYVATV RVKASKAGSM ALNMGWGWGS GESASGTLKV DTEWKDVKVT
410 420 430 440 450
YDNIPAKSCN LVLQPGSFDG VIDIASVKVD HIVKMNTLPL TEKEKKDTLT
460 470 480 490 500
YALDKWIGGI MTACDGKVKA WDVVNEALSS GNADAEGVYA LQHLKDQQDP
510 520 530 540 550
EKAATESFFW QDYLGDIDYV RTAVKLARKY GPQDMKLFIN DYNLEAAWDQ
560 570 580 590 600
NNKAKSLVAW IKRWEADGET KIDGIGSQMH VTCSMNADKQ KANEEAVVNM
610 620 630 640 650
LNILAGSKKL VKISELDMGC EDEAGNVIKT ENMTEEQHKA MSAYYKFIIE
660 670 680 690 700
KYFEIIPADQ QYGICQWCIT DAPTNSGWRK GEPVGLWDLD YNRKHTYGGF

ADGLNGK
Length:707
Mass (Da):78,252
Last modified:November 1, 1996 - v1
Checksum:i8484E75C60869DB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U53926 Genomic DNA. Translation: AAB81559.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U53926 Genomic DNA. Translation: AAB81559.1.

3D structure databases

ProteinModelPortaliQ52307.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi264731.PRU_2739.

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 2 hits.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiQ52307_PRERU
AccessioniPrimary (citable) accession number: Q52307
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 13, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.