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Protein
Submitted name:

Catabolite repression control protein

Gene

crc

Organism
Pseudomonas aeruginosa
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Catabolite repression control proteinImported (EC:3.1.11.2Imported)
Submitted name:
Exodeoxyribonuclease IIIImported
Submitted name:
Pseudomonas aeruginosa genome assembly PAE221Imported
Gene namesi
Name:crcImported
Synonyms:exoAImported
ORF Names:ERS445055_05682Imported, PA257_6717Imported, PA8380_60310Imported, PAE221_01284Imported, PAMH19_3299Imported, YQ19_33990Imported
OrganismiPseudomonas aeruginosaImported
Taxonomic identifieri287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000033992 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA5332.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA5332.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4F1RX-ray2.20A1-259[»]
4JG3X-ray1.80A1-259[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000034586.
KOiK01142.
OrthoDBiEOG6TBHJS.

Family and domain databases

Gene3Di3.60.10.10. 1 hit.
InterProiIPR004808. AP_endonuc_1.
IPR005135. Endo/exonuclease/phosphatase.
[Graphical view]
PANTHERiPTHR22748. PTHR22748. 1 hit.
PfamiPF03372. Exo_endo_phos. 1 hit.
[Graphical view]
SUPFAMiSSF56219. SSF56219. 1 hit.
TIGRFAMsiTIGR00633. xth. 1 hit.
PROSITEiPS51435. AP_NUCLEASE_F1_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q51380-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIISVNVNG IQAAAERGLL SWLQAQNADV ICLQDTRASA FDLDDPSFQL
60 70 80 90 100
DGYFLYACDA ELPEQGGVAL YSRLQPKAVI SGLGFETADR YGRYLQADFD
110 120 130 140 150
KVSIATLLLP SGQSGDESLN QKFKFMDDFT HYLSKQRRKR REYIYCGSLY
160 170 180 190 200
VAHQKMDVKN WRECQQMPGF LAPERAWLDE VFGNLGYADA LREVSREGDQ
210 220 230 240 250
FSWWPDSEQA EMLNLGWRFD YQVLTPGLRR FVRNAKLPRQ PRFSQHAPLI

VDYDWQLSI
Length:259
Mass (Da):29,845
Last modified:November 1, 1996 - v1
Checksum:iF17989CC51EBCD10
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U38241 Genomic DNA. Translation: AAC44428.1.
CP011317 Genomic DNA. Translation: AKE73035.1.
AP014651 Genomic DNA. Translation: BAQ43273.1.
AP014839 Genomic DNA. Translation: BAR70820.1.
CDAZ01000010 Genomic DNA. Translation: CEI14943.1.
CDFS01000053 Genomic DNA. Translation: CEI75704.1.
LN831024 Genomic DNA. Translation: CKI27459.1.
PIRiB82978.
RefSeqiNP_254019.1. NC_002516.2.
WP_003098313.1. NZ_KN716119.1.

Genome annotation databases

EnsemblBacteriaiCDO84456; CDO84456; PSE305_53190.
KEA43008; KEA43008; CR64_04185.
KEF90700; KEF90700; RLJV_21460.
KEI26907; KEI26907; CH80_13875.
KFL09769; KFL09769; DR97_2703.
KGB87274; KGB87274; JF43_12550.
KHE34461; KHE34461; LH31_13755.
KHE61662; KHE61662; D407_0210610.
KHE65358; KHE65358; D480_0206745.
GeneIDi878037.
KEGGipae:PA5332.
paeb:NCGM1900_6175.
PATRICi19845521. VBIPseAer58763_5587.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U38241 Genomic DNA. Translation: AAC44428.1.
CP011317 Genomic DNA. Translation: AKE73035.1.
AP014651 Genomic DNA. Translation: BAQ43273.1.
AP014839 Genomic DNA. Translation: BAR70820.1.
CDAZ01000010 Genomic DNA. Translation: CEI14943.1.
CDFS01000053 Genomic DNA. Translation: CEI75704.1.
LN831024 Genomic DNA. Translation: CKI27459.1.
PIRiB82978.
RefSeqiNP_254019.1. NC_002516.2.
WP_003098313.1. NZ_KN716119.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4F1RX-ray2.20A1-259[»]
4JG3X-ray1.80A1-259[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA5332.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCDO84456; CDO84456; PSE305_53190.
KEA43008; KEA43008; CR64_04185.
KEF90700; KEF90700; RLJV_21460.
KEI26907; KEI26907; CH80_13875.
KFL09769; KFL09769; DR97_2703.
KGB87274; KGB87274; JF43_12550.
KHE34461; KHE34461; LH31_13755.
KHE61662; KHE61662; D407_0210610.
KHE65358; KHE65358; D480_0206745.
GeneIDi878037.
KEGGipae:PA5332.
paeb:NCGM1900_6175.
PATRICi19845521. VBIPseAer58763_5587.

Organism-specific databases

PseudoCAPiPA5332.

Phylogenomic databases

HOGENOMiHOG000034586.
KOiK01142.
OrthoDBiEOG6TBHJS.

Family and domain databases

Gene3Di3.60.10.10. 1 hit.
InterProiIPR004808. AP_endonuc_1.
IPR005135. Endo/exonuclease/phosphatase.
[Graphical view]
PANTHERiPTHR22748. PTHR22748. 1 hit.
PfamiPF03372. Exo_endo_phos. 1 hit.
[Graphical view]
SUPFAMiSSF56219. SSF56219. 1 hit.
TIGRFAMsiTIGR00633. xth. 1 hit.
PROSITEiPS51435. AP_NUCLEASE_F1_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The nucleotide sequence of the Pseudomonas aeruginosa pyrE-crc-rph region and the purification of the crc gene product."
    Macgregor C.H., Arora S.K., Hager P.W., Dail M.B., Phibbs P.V. Jr.
    J. Bacteriol. 178:5627-5635(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PAO1Imported.
  2. "Structure analysis of the global metabolic regulator Crc from Pseudomonas aeruginosa."
    Wei Y., Zhang H., Gao Z.Q., Xu J.H., Liu Q.S., Dong Y.H.
    IUBMB Life 65:50-57(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS).
  3. "The Pseudomonas aeruginosa catabolite repression control protein Crc is devoid of RNA binding activity."
    Milojevic T., Grishkovskaya I., Sonnleitner E., Djinovic-Carugo K., Blasi U.
    PLoS ONE 8:e64609-e64609(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS).
  4. Manrique Marina
    Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Pae221_ST274Imported.
  5. Wibberg Daniel
    Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MH19Imported.
  6. Akiyama T., Kubota S., Kirikae T.
    Submitted (OCT-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NCGM257Imported.
  7. "Draft Genome Sequence of the Quorum-Sensing and Biofilm-Producing Pseudomonas aeruginosa Strain Pae221, Belonging to the Epidemic High-Risk Clone Sequence Type 274."
    Ocampo-Sosa A.A., Fernandez-Martinez M., Cabot G., Pena C., Tubau F., Oliver A., Martinez-Martinez L.
    Genome Announc. 3:1-2(2015)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Pae221_ST274Imported.
  8. "Complete Genome Sequence of Pseudomonas aeruginosa Strain 8380, Isolated from the Human Gut."
    Ichise Y., Kosuge T., Uwate M., Nakae T., Maseda H.
    Genome Announc. 0:0-0(2015)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 8380Imported.
  9. "Molecular epidemiological risk assessment of nosocomial infection of Pseudomonas aeruginosa."
    Miyoshi-Akiyama T., Kubota S., Kirikae T.
    Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NCGM257Imported.
  10. Informatics Pathogen
    Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NCTC10332Imported.
  11. "Pseudomonas aeruginosa Carb 01 63."
    Kraak W., van der Zee A.
    Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Carb01 63Imported.

Entry informationi

Entry nameiQ51380_PSEAI
AccessioniPrimary (citable) accession number: Q51380
Secondary accession number(s): Q7DC41
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 22, 2015
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.