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Protein
Submitted name:

Pyoverdine synthetase D

Gene

pvdD

Organism
Pseudomonas aeruginosa
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Protein family/group databases

ESTHERipseae-PVDD. Thioesterase.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyoverdine synthetase DImported
Gene namesi
Name:pvdDImported
OrganismiPseudomonas aeruginosaImported
Taxonomic identifieri287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

PTM / Processingi

Proteomic databases

PaxDbiQ51338.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA2399.

Structurei

3D structure databases

ProteinModelPortaliQ51338.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1024 – 109168Acyl carrierInterPro annotationAdd
BLAST
Domaini2085 – 215268Acyl carrierInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105C0W. Bacteria.
COG1020. LUCA.
COG3319. LUCA.

Family and domain databases

Gene3Di1.10.1200.10. 2 hits.
3.40.50.1820. 2 hits.
InterProiIPR010071. AA_adenyl_domain.
IPR029058. AB_hydrolase.
IPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
IPR001242. Condensatn.
IPR020806. PKS_PP-bd.
IPR009081. PP-bd_ACP.
IPR006162. Ppantetheine_attach_site.
IPR001031. Thioesterase.
[Graphical view]
PfamiPF00501. AMP-binding. 2 hits.
PF13193. AMP-binding_C. 2 hits.
PF00668. Condensation. 2 hits.
PF00550. PP-binding. 2 hits.
PF00975. Thioesterase. 1 hit.
[Graphical view]
SMARTiSM00823. PKS_PP. 2 hits.
[Graphical view]
SUPFAMiSSF47336. SSF47336. 2 hits.
SSF53474. SSF53474. 1 hit.
TIGRFAMsiTIGR01733. AA-adenyl-dom. 2 hits.
PROSITEiPS50075. ACP_DOMAIN. 2 hits.
PS00455. AMP_BINDING. 2 hits.
PS00012. PHOSPHOPANTETHEINE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q51338-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQALIEKVGS LSPQERKALA VLLKQQGVNL FEIAPVFKRQ DGEPLRLSYA
60 70 80 90 100
QERQWFLWQL EPESAAYHIP SVLRLRGRLD LDALQRSFDS LVARHETLRT
110 120 130 140 150
RFRLDGDEAR QEIAASMALP LDIVALGPLE EGALARQVET TIARPFDLER
160 170 180 190 200
GPLLRVSLLR LAEDDHVLVL VQHHIVSDGW SMQVMVEELV QLYAAYSRGL
210 220 230 240 250
EVALPALPIQ YADYALWQRS WMEAGEKERQ LAYWTGLLGG EQPVLELPFD
260 270 280 290 300
RPRPVRQSHR GAQFILELDI DLSQALRRVA QQEGATAFAL LLASFQALLY
310 320 330 340 350
RYSGQADIRV GVPIANRNRV ETERLIGFFV NTQVLKADLD GRMGFDELLA
360 370 380 390 400
QARQRALEAQ AHQDLPFEQL VEAFEPERSL SHNPLFQVLF NYQSEARGNG
410 420 430 440 450
QAFRFDELQM ESVQFDSRTA QFDLTLDLTD EEQRFCAVFD YATDLFDAST
460 470 480 490 500
VERLAGHWRN LLRGIVANPR QRLGELPLLD APERRQTLSE WNPAQRECAV
510 520 530 540 550
QGTLQQRFEE QARQRPQAVA LILDEQRLSY GELNARANRL AHCLIARGVG
560 570 580 590 600
ADVPVGLALE RSLDMLVGLL AILKAGGAYL PLDPAAPEER LAHILDDSGV
610 620 630 640 650
RLLLTQGHLL ERLPRQAGVE VLAIDGLVLD GYAESDPLPT LSADNLAYVI
660 670 680 690 700
YTSGSTGKPK GTLLTHRNAL RLFSATEAWF GFDERDVWTL FHSYAFDFSV
710 720 730 740 750
WEIFGALLYG GCLVIVPQWV SRSPEDFYRL LCREGVTVLN QTPSAFKQLM
760 770 780 790 800
AVACSADMAT QQPALRYVIF GGEALDLQSL RPWFQRFGDR QPQLVNMYGI
810 820 830 840 850
TETTVHVTYR PVSEADLEGG LVSPIGGTIP DLSWYILDRD LNPVPRGAVG
860 870 880 890 900
ELYIGRAGLA RGYLRRPGLS ATRFVPNPFP GGAGERLYRT GDLARFQADG
910 920 930 940 950
NIEYIGRIDH QVKVRGFRIE LGEIEAALAG LAGVRDAVVL AHDGVGGTQL
960 970 980 990 1000
VGYVVADSAE DAERLRESLR ESLKRHLPDY MVPAHLMLLE RMPLTVNGKL
1010 1020 1030 1040 1050
DRQALPQPDA SLSQQAYRAP GSELEQRIAA IWSEILGVER VGLDDNFFEL
1060 1070 1080 1090 1100
GGHSLLATRV ISRVRQEQQL DASLKALFER PVLEAFAQGL ERTTDAVSTI
1110 1120 1130 1140 1150
PLADRQQPLA LSFAQERQWF LWQLEPESAA YHIPSALRLR GRLDVDALQR
1160 1170 1180 1190 1200
SFDSLVARHE TLRTRFRLEG GRSYQQVQPA VSVSIEREQF GEEGLIERIQ
1210 1220 1230 1240 1250
AIVVQPFDLE RGPLLRVNLL QLAEDDHVLV LVQHHIVSDG WSMQVMVEEL
1260 1270 1280 1290 1300
VQLYAAYSQG LDVVLPALPI QYADYALWQR SWMEAGEKER QLAYWTGLLG
1310 1320 1330 1340 1350
GEQPVLELPF DRPRPARQSH RGAQLGFELS RELVEAVRAL AQREGASSFM
1360 1370 1380 1390 1400
LLLASFQALL YRYSGQADIR VGVPIANRNR VETERLIGFF VNTQVLKADL
1410 1420 1430 1440 1450
DGRMGFDELL AQARQRALEA QAHQDLPFEQ LVEALQPERN ASHNPLFQVL
1460 1470 1480 1490 1500
FNHQSEIRSV TPEVQLEDLR LEGLAWDGQT AQFDLTLDIQ EDENGIWASF
1510 1520 1530 1540 1550
DYATDLFDAS TVERLAGHWR NLLRGIVANP RQRLGELPLL DAPERRQTLS
1560 1570 1580 1590 1600
EWNPAQRECA VQGTLQQRFE EQARQRPQAV ALILDEQRLS YGELNARANR
1610 1620 1630 1640 1650
LAHCLIARGV GADVPVGLAL ERSLDMLVGL LAILKAGGAY LPLDPAAPEE
1660 1670 1680 1690 1700
RLAHILDDSG VRLLLTQGHL LERLPRQAGV EVLAIDGLVL DGYAESDPLP
1710 1720 1730 1740 1750
TLSADNLAYV IYTSGSTGKP KGTLLTHRNA LRLFSATEAW FGFDERDVWT
1760 1770 1780 1790 1800
LFHSYAFDFS VWEIFGALLY GGRLVIVPQW VSRSPEDFYR LLCREGVTVL
1810 1820 1830 1840 1850
NQTPSAFKQL MAVACSADMA TQQPALRYVI FGGEALDLQS LRPWFQRFGD
1860 1870 1880 1890 1900
RQPQLVNMYG ITETTVHVTY RPVSEADLKG GLVSPIGGTI PDLSWYILDR
1910 1920 1930 1940 1950
DLNPVPRGAV GELYIGRAGL ARGYLRRPGL SATRFVPNPF PGGAGERLYR
1960 1970 1980 1990 2000
TGDLARFQAD GNIEYIGRID HQVKVRGFRI ELGEIEAALA GLAGVRDAVV
2010 2020 2030 2040 2050
LAHDGVGGTQ LVGYVVADSA EDAERLRESL RESLKRHLPD YMVPAHLMLL
2060 2070 2080 2090 2100
ERMPLTVNGK LDRQALPQPD ASLSQQAYRA PGSELEQRIA AIWAEILGVE
2110 2120 2130 2140 2150
RVGLDDNFFE LGGHSLLLLM LKERIGDTCQ RTLSISQLMT HASVAEQAAC
2160 2170 2180 2190 2200
IEGQARESLL VPLNGRREGS PLFMFHPSFG SVHCYKTLAM ALRDRHPVKG
2210 2220 2230 2240 2250
VVCRALLGAG REVPEWDDMV AEYAEQLLQE HPEGVFNLAG WSLGGNLAMD
2260 2270 2280 2290 2300
VAARLEQRGR QVAFVGWIDA PAPVRVEAFW NEIGPTPEAV PNLSVGEMRV
2310 2320 2330 2340 2350
ELLGVMFPER AEHIERAWSS ICSATTDDEQ RWTRMSDWAE AEIGAEFATL
2360 2370 2380 2390 2400
RSEIAQSNEL EVSWELKQIL DERLKAMDYP RLTAKVSLWW AARSTNAIQR
2410 2420 2430 2440
SAVERSMAEA IGAERVEPVR VLDTRHDKII DHPEFVQSFR AALERAGR
Length:2,448
Mass (Da):273,800
Last modified:November 1, 1996 - v1
Checksum:i09C07880D054DE3A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U07359 Genomic DNA. Translation: AAB60198.1.
PIRiS53999.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U07359 Genomic DNA. Translation: AAB60198.1.
PIRiS53999.

3D structure databases

ProteinModelPortaliQ51338.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA2399.

Protein family/group databases

ESTHERipseae-PVDD. Thioesterase.

Proteomic databases

PaxDbiQ51338.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4105C0W. Bacteria.
COG1020. LUCA.
COG3319. LUCA.

Family and domain databases

Gene3Di1.10.1200.10. 2 hits.
3.40.50.1820. 2 hits.
InterProiIPR010071. AA_adenyl_domain.
IPR029058. AB_hydrolase.
IPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
IPR001242. Condensatn.
IPR020806. PKS_PP-bd.
IPR009081. PP-bd_ACP.
IPR006162. Ppantetheine_attach_site.
IPR001031. Thioesterase.
[Graphical view]
PfamiPF00501. AMP-binding. 2 hits.
PF13193. AMP-binding_C. 2 hits.
PF00668. Condensation. 2 hits.
PF00550. PP-binding. 2 hits.
PF00975. Thioesterase. 1 hit.
[Graphical view]
SMARTiSM00823. PKS_PP. 2 hits.
[Graphical view]
SUPFAMiSSF47336. SSF47336. 2 hits.
SSF53474. SSF53474. 1 hit.
TIGRFAMsiTIGR01733. AA-adenyl-dom. 2 hits.
PROSITEiPS50075. ACP_DOMAIN. 2 hits.
PS00455. AMP_BINDING. 2 hits.
PS00012. PHOSPHOPANTETHEINE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Cloning and nucleotide sequence analysis of the ferripyoverdine receptor gene fpvA of Pseudomonas aeruginosa."
    Poole K., Neshat S., Krebes K., Heinrichs D.E.
    J. Bacteriol. 175:4597-4604(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PAOImported.
  2. "Nucleotide sequence of pvdD, a pyoverdine biosynthetic gene from Pseudomonas aeruginosa: PvdD has similarity to peptide synthetases."
    Merriman T.R., Merriman M.E., Lamont I.L.
    J. Bacteriol. 177:252-258(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PAOImported.
  3. "Identification of a DNA sequence motif required for expression of iron-regulated genes in pseudomonads."
    Rombel I.T., McMorran B.J., Lamont I.L.
    Mol. Gen. Genet. 246:519-528(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PAOImported.

Entry informationi

Entry nameiQ51338_PSEAI
AccessioniPrimary (citable) accession number: Q51338
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.