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Protein
Submitted name:

Class 1 outer membrane protein variable region 2

Gene

porA

Organism
Neisseria meningitidis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. porin activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Class 1 outer membrane protein variable region 2Imported
Gene namesi
Name:porAImported
OrganismiNeisseria meningitidisImported
Taxonomic identifieri487 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

InterProiIPR001702. Porin_Gram-ve.
[Graphical view]
PfamiPF00267. Porin_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q51183-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
QFVPIQNSKS AYTPAHVVVN NKVATHVPAV VGKPGSDVYY AGLNYKNGGF

AGNYAFKY
Length:58
Mass (Da):6,220
Last modified:November 1, 1996 - v1
Checksum:i6FF363BF7A0C06A5
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei58 – 581Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z14266 Genomic DNA. Translation: CAA78633.1.
PIRiS26108.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z14266 Genomic DNA. Translation: CAA78633.1.
PIRiS26108.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR001702. Porin_Gram-ve.
[Graphical view]
PfamiPF00267. Porin_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The class 1 outer membrane protein of Neisseria meningitidis: gene sequence and structural and immunological similarities to gonococcal porins."
    Barlow A.K., Heckels J.E., Clarke I.N.
    Mol. Microbiol. 3:131-139(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: L2502Imported.
  2. "Deduced amino acid sequences of class 1 protein (PorA) from three strains of Neisseria meningitidis. Synthetic peptides define the epitopes responsible for serosubtype specificity."
    McGuinnes B., Barlow A.K., Clarke I.N., Farley J.E., Anilionis A., Poolman J.T., Heckels J.E.
    J. Exp. Med. 171:1871-1882(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: L2502Imported.
  3. "Class 1 outer membrane protein of Neisseria meningitidis: Epitope analysis of the antigenic diversity between strains, implications for subtype definition and molecular epidemiology."
    McGuinness B.T., Lambden P.R., Heckels J.E.
    Submitted (JUL-1992) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: L2502Imported.
  4. "Crystal structure of an Anti-meningococcal subtype P1.4 PorA antibody provides basis for peptide-vaccine design."
    Oomen C.J., Hoogerhout P., Kuipers B., Vidarsson G., van Alphen L., Gros P.
    J. Mol. Biol. 351:1070-1080(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.95 ANGSTROMS) OF 16-26.

Entry informationi

Entry nameiQ51183_NEIME
AccessioniPrimary (citable) accession number: Q51183
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structure

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.