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Protein
Submitted name:

Galactan 1,3-beta-galactosidase

Gene
N/A
Organism
Phanerochaete chrysosporium (White-rot fungus) (Sporotrichum pruinosum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Protein family/group databases

CAZyiCBM35. Carbohydrate-Binding Module Family 35.
GH43. Glycoside Hydrolase Family 43.
mycoCLAPiGAX43A_PHACH.

Names & Taxonomyi

Protein namesi
Submitted name:
Galactan 1,3-beta-galactosidaseImported (EC:3.2.1.145Imported)
OrganismiPhanerochaete chrysosporium (White-rot fungus) (Sporotrichum pruinosum)Imported
Taxonomic identifieri5306 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesPolyporalesPhanerochaetaceaePhanerochaete

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 448428Sequence analysisPRO_5004248224Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ50KB2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini326 – 448123CBM6 (carbohydrate binding type-6)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 43 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
2.60.120.260. 1 hit.
InterProiIPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PANTHERiPTHR22925. PTHR22925. 1 hit.
PfamiPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF75005. SSF75005. 1 hit.
PROSITEiPS51175. CBM6. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q50KB2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIFAHLLLP ALSLLLPAYA QNQIVSGAAW TDTAGNTIQA HGAGILQVGS
60 70 80 90 100
TFYWFGEDKS HNSALFKAVS CYTSSDLVNW SRQNDALSPI AGTMISTSNV
110 120 130 140 150
VERPKVIFNQ KNSEYVMWFH SDSSNYGAAM VGVATAKTPC GPYTYKGSFK
160 170 180 190 200
PLGADSRDES IFQDDDSAQT AYLLYASDNN QNFKISRLDA NYYNVTAQVS
210 220 230 240 250
VMNGATLEAP GIVKHNGEYF LIASHTSGWA PNPNKWFSAS SLAGPWSAQQ
260 270 280 290 300
DIAPSATRTW YSQNAFDLPL GSNAIYMGDR WRPSLLGSSR YIWYPLDFSS
310 320 330 340 350
GAPQIVHADV WSVNVQAGTY SVASGTSYEA ENGQRGGSST ILSGSGFSGG
360 370 380 390 400
KAVGYLGHGG TVTINNVQSN GGSHWVALYF ANGDSTYRNV TVSVNGGPSV
410 420 430 440
LVDQPDSGGG NVVISVPVKL NLNSGENSIT FGSGQSNYAA DLDKIIVY
Length:448
Mass (Da):47,811
Last modified:June 7, 2005 - v1
Checksum:i7D4986CF186D82B4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB200390 mRNA. Translation: BAD98241.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB200390 mRNA. Translation: BAD98241.1.

3D structure databases

ProteinModelPortaliQ50KB2.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM35. Carbohydrate-Binding Module Family 35.
GH43. Glycoside Hydrolase Family 43.
mycoCLAPiGAX43A_PHACH.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
2.60.120.260. 1 hit.
InterProiIPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PANTHERiPTHR22925. PTHR22925. 1 hit.
PfamiPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF75005. SSF75005. 1 hit.
PROSITEiPS51175. CBM6. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "An exo-beta-1,3-galactanase having a novel beta-1,3-galactan-binding module from Phanerochaete chrysosporium."
    Ichinose H., Yoshida M., Kotake T., Kuno A., Igarashi K., Tsumuraya Y., Samejima M., Hirabayashi J., Kobayashi H., Kaneko S.
    J. Biol. Chem. 280:25820-25829(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ50KB2_PHACH
AccessioniPrimary (citable) accession number: Q50KB2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 7, 2005
Last sequence update: June 7, 2005
Last modified: December 9, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.