Q50EX6 (ODO1_PETHY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Protein ODORANT1

Alternative name(s):
MYB-like protein ODO1

Gene names

Name:

ODO1

Organism

Petunia hybrida (Petunia)

Taxonomic identifier

4102 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › asterids › lamiids › Solanales › Solanaceae › Petunioideae › Petunia

Protein attributes

Sequence length	294 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	R2R3 MYB-type transcription factor controlling the production of volatile benzoides in flowers by regulating the shikimate pathway, namely by activation of the 5-enol-pyruvylshikimate-3-phosphate synthase gene. This scent, mostly produced in the evening and night by the petals, attracts the pollinators. Anthocyanins production is not controlled by ODO1 as color and scent are produced at different stages of development. Ref.1
Subcellular location	Nucleus Probable.
Tissue specificity	Restricted to the petals, with the highest expression in the limb. Ref.1
Developmental stage	Expressed in mature flowers and decreases upon pollination. Ref.1
Induction	Increases before the onset of volatile emission at the end of the light period, peaks at night and decreases when volatile emission declines early morning.
Sequence similarities	Contains 2 HTH myb-type DNA-binding domains.

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Cellular component	Nucleus
Domain	Repeat
Ligand	DNA-binding
Molecular function	Activator
Gene Ontology (GO)
Biological_process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW chromatin binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 294	294	Protein ODORANT1		PRO_0000197081
Regions
	Domain	9 – 61	53	HTH myb-type 1
	Domain	62 – 116	55	HTH myb-type 2
	DNA binding	37 – 61	25	H-T-H motif By similarity
	DNA binding	89 – 112	24	H-T-H motif By similarity
	Compositional bias	165 – 168	4	Poly-Ala
	Compositional bias	177 – 190	14	Ser-rich

Sequences

	Sequence		Length	Mass (Da)
	Q50EX6 [UniParc]. Last modified June 7, 2005. Version 1. Checksum: 0C9FE79309EBADD8	FASTA	294	33,090
	10 20 30 40 50 60 MGRQPCCDKL GVKKGPWTAE EDKKLISFIL TNGQCCWRAV PKLAGLKRCG KSCRLRWTNY 70 80 90 100 110 120 LRPDLKRGLL SDAEEKLVID LHSRLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLLKMG 130 140 150 160 170 180 IDPVTHEPLK KEANLSDQPT TESDQNKENG HQQVQVVPQS TNVTAAAATS TEFDNNSSFS 190 200 210 220 230 240 SSASSSENSS CTTDESKLVF DNLSENDPLL SCLLEADTPL IDSPWEFPMS STTTVEEPKS 250 260 270 280 290 FDSIISNMTS WEDTFNWLSG YQEFGINDFG FDNCFNHVEL DIFKTIDNVE NRHG

References

[1]	"ODORANT1 regulates fragrance biosynthesis in petunia flowers." Verdonk J.C., Haring M.A., van Tunen A.J., Schuurink R.C. Plant Cell 17:1612-1624(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE. Strain: cv. W115.

Web resources

Protein Spotlight

The life of a whiff - Issue 60 of July 2005

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY705977 mRNA. Translation: AAV98200.1.
3D structure databases
ProteinModelPortal	Q50EX6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
Gene3D	1.10.10.60. 2 hits.
InterPro	IPR009057. Homeodomain-like. IPR017930. Myb_dom. IPR001005. SANT/Myb. [Graphical view]
Pfam	PF00249. Myb_DNA-binding. 2 hits. [Graphical view]
SMART	SM00717. SANT. 2 hits. [Graphical view]
SUPFAM	SSF46689. Homeodomain_like. 1 hit.
PROSITE	PS51294. HTH_MYB. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ODO1_PETHY

Accession

Primary (citable) accession number: Q50EX6

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 21, 2005
Last sequence update:	June 7, 2005
Last modified:	March 6, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program