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Protein
Submitted name:

Variacin (Bacteriocin)

Gene
N/A
Organism
Kocuria varians (Micrococcus varians)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Protein family/group databases

TCDBi1.C.21.1.2. the lacticin 481 (lacticin 481) family.

Names & Taxonomyi

Protein namesi
Submitted name:
Variacin (Bacteriocin)Imported
OrganismiKocuria varians (Micrococcus varians)Imported
Taxonomic identifieri1272 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeKocuria

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Family and domain databases

InterProiIPR007682. Lantibiotic_typ-A_Lactobact.
[Graphical view]
PfamiPF04604. L_biotic_typeA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q50848-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40 
MTNAFQALDE VTDAELDAIL GGGSGVIPTI SHECHMNSFQ FVFTCCS
Length:47
Mass (Da):5,009
Last modified:November 1, 1996 - v1
Checksum:iC7BB4BA3F80D647A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X93303 Genomic DNA. Translation: CAA63706.1.
PIRiA58711.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X93303 Genomic DNA. Translation: CAA63706.1.
PIRiA58711.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

TCDBi1.C.21.1.2. the lacticin 481 (lacticin 481) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR007682. Lantibiotic_typ-A_Lactobact.
[Graphical view]
PfamiPF04604. L_biotic_typeA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ50848_KOCVA
AccessioniPrimary (citable) accession number: Q50848
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 16, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.