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Q504I3

- Q504I3_DANRE

UniProt

Q504I3 - Q504I3_DANRE

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Protein
Submitted name:

Hbl3 protein

Gene
hbl3, mbl
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. carbohydrate binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumSAAS annotations, LectinSAAS annotations

Enzyme and pathway databases

ReactomeiREACT_101763. Lectin pathway of complement activation.

Names & Taxonomyi

Protein namesi
Submitted name:
Hbl3 proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:hbl3Imported
Synonyms:mblImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437: Chromosome 2

Organism-specific databases

ZFINiZDB-GENE-000427-2. hbl3.

Subcellular locationi

GO - Cellular componenti

  1. collagen trimer Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotations

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000089300.

Family & Domainsi

Sequence similaritiesi

Contains C-type lectin domain.SAAS annotations

Keywords - Domaini

CollagenSAAS annotations

Phylogenomic databases

GeneTreeiENSGT00700000104102.
HOVERGENiHBG108270.
InParanoidiQ504I3.
OMAiWDISSEA.
OrthoDBiEOG7DFXD9.
TreeFamiTF330481.

Family and domain databases

Gene3Di3.10.100.10. 1 hit.
InterProiIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR018378. C-type_lectin_CS.
IPR016187. C-type_lectin_fold.
IPR008160. Collagen.
[Graphical view]
PfamiPF01391. Collagen. 1 hit.
PF00059. Lectin_C. 1 hit.
[Graphical view]
SMARTiSM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 1 hit.
PROSITEiPS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q504I3-1 [UniParc]FASTAAdd to Basket

« Hide

MALLKLFLGA LLLLQLVLQL LAGAADPQSL NCPAYAGVPG TPGHNGLPGR    50
DGRDGRDGAT GPKGEKGEPG VNVQGPPGKA GPPGPAGAKG ERGPSGLPGQ 100
DCMSDSLKSE LQKLSDKIAL IEKVVNFKTF KKVGQKYYVT DDVEETFDKG 150
MQYCSSNGGA LVLPRTLEEN ALLKVFVSSA FKRLFIRITD REKEGEFVDT 200
DRKKLTFTNW GPNQPDNYKG AQDCGAIADS GLWDDVSCDS LYPIICEIEI 250
K 251
Length:251
Mass (Da):26,815
Last modified:June 7, 2005 - v1
Checksum:iE30AB525A917B82E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL954692 Genomic DNA. No translation available.
BC095009 mRNA. Translation: AAH95009.1.
BC165937 mRNA. Translation: AAI65937.1.
RefSeqiNP_571645.2. NM_131570.2.
XP_005171315.1. XM_005171258.1.
UniGeneiDr.77668.

Genome annotation databases

EnsembliENSDART00000098529; ENSDARP00000089300; ENSDARG00000068220.
GeneIDi100008009.
KEGGidre:100008009.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL954692 Genomic DNA. No translation available.
BC095009 mRNA. Translation: AAH95009.1 .
BC165937 mRNA. Translation: AAI65937.1 .
RefSeqi NP_571645.2. NM_131570.2.
XP_005171315.1. XM_005171258.1.
UniGenei Dr.77668.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 7955.ENSDARP00000089300.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSDART00000098529 ; ENSDARP00000089300 ; ENSDARG00000068220 .
GeneIDi 100008009.
KEGGi dre:100008009.

Organism-specific databases

CTDi 100008009.
ZFINi ZDB-GENE-000427-2. hbl3.

Phylogenomic databases

GeneTreei ENSGT00700000104102.
HOVERGENi HBG108270.
InParanoidi Q504I3.
OMAi WDISSEA.
OrthoDBi EOG7DFXD9.
TreeFami TF330481.

Enzyme and pathway databases

Reactomei REACT_101763. Lectin pathway of complement activation.

Miscellaneous databases

NextBioi 20787713.

Family and domain databases

Gene3Di 3.10.100.10. 1 hit.
InterProi IPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR018378. C-type_lectin_CS.
IPR016187. C-type_lectin_fold.
IPR008160. Collagen.
[Graphical view ]
Pfami PF01391. Collagen. 1 hit.
PF00059. Lectin_C. 1 hit.
[Graphical view ]
SMARTi SM00034. CLECT. 1 hit.
[Graphical view ]
SUPFAMi SSF56436. SSF56436. 1 hit.
PROSITEi PS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: LiverImported.
  2. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: PCR rescueImported.
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.
  4. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.

Entry informationi

Entry nameiQ504I3_DANRE
AccessioniPrimary (citable) accession number: Q504I3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 7, 2005
Last sequence update: June 7, 2005
Last modified: September 3, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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