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Protein
Submitted name:

Zgc:112375

Gene

gba3

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Submitted name:
Zgc:112375Imported
Submitted name:
Zgc:112375 proteinImported
Gene namesi
Name:gba3Imported
ORF Names:zgc:112375Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-050522-351. gba3.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000065233.

Structurei

3D structure databases

ProteinModelPortaliQ502A1.
SMRiQ502A1. Positions 8-466.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0626. Eukaryota.
COG2723. LUCA.
HOGENOMiHOG000088630.
HOVERGENiHBG053101.
KOiK05350.
PhylomeDBiQ502A1.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR033132. Glyco_hydro_1_N_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q502A1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAIDITAFP KDFAWGAATA AYQIEGGWNM DGRGPSIWDT FCHEGGRVFG
60 70 80 90 100
DNTGDVACNS YQLWEEDLKC IQQLGLSHYR LSVSWSRILP NGTTNHINPK
110 120 130 140 150
GVEYYNKVID SLIASGVTPM ITLWHMDLPQ ALQDCGGWCS AEIADIFESY
160 170 180 190 200
ASFCFKNFGD RVKLWITLNE PYVCAMLGYE DGIFAPGIKD PGLSVYVAGH
210 220 230 240 250
NMLRAHAKAW HAYNTHFRPS QGGQVSLALY SDRAEPLTAK DAAATERYKE
260 270 280 290 300
FTLDWFACPV FCTGDYPESM RSRIENRSLE LGYKQGSRLP HFSKDEPSPL
310 320 330 340 350
GTADFFALNY YTSRKVKDLS ENTELSFVGD QGAEGVIDPS WPICGVHWLA
360 370 380 390 400
VYPEGLRKLL KYIKDTYTSV PIYITENGFS QMGPVQIEDV DRSQFYEDTL
410 420 430 440 450
QQVGKAISQD GVNVKGYFAW SLLDNFEWND GFNVRFGLFH VDFSSSELKR
460 470
TLYRSGRDYA ALIAKHRSQS KPKSI
Length:475
Mass (Da):53,437
Last modified:June 7, 2005 - v1
Checksum:iB239A9F0283492F3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC095794 mRNA. Translation: AAH95794.1.
BC165748 mRNA. Translation: AAI65748.1.
RefSeqiNP_001018529.1. NM_001020693.1.
UniGeneiDr.78437.

Genome annotation databases

GeneIDi553722.
KEGGidre:553722.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC095794 mRNA. Translation: AAH95794.1.
BC165748 mRNA. Translation: AAI65748.1.
RefSeqiNP_001018529.1. NM_001020693.1.
UniGeneiDr.78437.

3D structure databases

ProteinModelPortaliQ502A1.
SMRiQ502A1. Positions 8-466.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000065233.

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi553722.
KEGGidre:553722.

Organism-specific databases

CTDi57733.
ZFINiZDB-GENE-050522-351. gba3.

Phylogenomic databases

eggNOGiKOG0626. Eukaryota.
COG2723. LUCA.
HOGENOMiHOG000088630.
HOVERGENiHBG053101.
KOiK05350.
PhylomeDBiQ502A1.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR033132. Glyco_hydro_1_N_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Mixed tissueImported.
  2. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: PCR rescueImported.

Entry informationi

Entry nameiQ502A1_DANRE
AccessioniPrimary (citable) accession number: Q502A1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 7, 2005
Last sequence update: June 7, 2005
Last modified: June 8, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.