Q4ZY75 (Q4ZY75_PSEU2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribose-phosphate aldolase EMBL AAY35897.1
EC=4.1.2.4 EMBL AAY35897.1

Gene names

Ordered Locus Names:

Psyr_0839

Organism

Pseudomonas syringae pv. syringae (strain B728a) [Complete proteome] [HAMAP] EMBL AAY35897.1

Taxonomic identifier

205918 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae

Protein attributes

Sequence length	261 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. SAAS SAAS011343
Catalytic activity	2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. SAAS SAAS011343
Pathway	Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. SAAS SAAS011343

Ontologies

Keywords
Ligand	Schiff base SAAS SAAS011343
Molecular function	Lyase SAAS SAAS011343 EMBL AAY35897.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q4ZY75 [UniParc]. Last modified June 7, 2005. Version 1. Checksum: 411F0A3B31FAB65C	FASTA	261	27,821
	10 20 30 40 50 60 MKEMTADDER LARQVIGLLE LFALNTDDTE QRIVGICRRA CTPVGPVAAV SVQQRFVCLA 70 80 90 100 110 120 RTTLDRLQAR HIKVVAVVNF PHGSSNVQSV IAQVRAALMA GADEIDVVYP FRALLGGDRQ 130 140 150 160 170 180 PGLAMISACS ALCAGQVMLT ATLETGDLRD SQMILDACRD AIVSGADFIK TSTGKAARHV 190 200 210 220 230 240 TPQAARIMLE SIADVGGQVG LKVAGGIRTF DEARVYMALV RARFGLQWIN AGRFRLGGSS 250 260 VLDDLLARLG LLESHGGGDG F

References

[1]

"Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000." Feil H., Feil W.S., Chain P., Larimer F., Dibartolo G., Copeland A., Lykidis A., Trong S., Nolan M., Goltsman E., Thiel J., Malfatti S., Loper J.E., Lapidus A., Detter J.C., Land M., Richardson P.M., Kyrpides N.C., Ivanova N., Lindow S.E. Proc. Natl. Acad. Sci. U.S.A. 102:11064-11069(2005) [PubMed: 16043691] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000075 Genomic DNA. Translation: AAY35897.1.
RefSeq	YP_233935.1. NC_007005.1.
3D structure databases
ProteinModelPortal	Q4ZY75.
ModBase	Search...
Protein-protein interaction databases
STRING	Q4ZY75.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3366326.
GenomeReviews	Gene locus Psyr_0839 in contig CP000075_GR.
KEGG	psb:Psyr_0839.
NMPDR	fig|205918.4.peg.1160.
PATRIC	19982141. VBIPseSyr42314_0866.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0274.
HOGENOM	HBG636421.
OMA	ELVQQCK.
PhylomeDB	Q4ZY75.
ProtClustDB	CLSK409974.
Enzyme and pathway databases
BioCyc	PSYR205918:PSYR_0839-MONOMER.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/AroFGH_arch. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01619.
PANTHER	PTHR10889. DeoC. 1 hit.
Pfam	PF01791. DeoC. 1 hit. [Graphical view]
PIRSF	PIRSF001357. DeoC. 1 hit.
TIGRFAMs	TIGR00126. DeoC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q4ZY75_PSEU2

Accession

Primary (citable) accession number: Q4ZY75

Entry history

Integrated into UniProtKB/TrEMBL:	June 7, 2005
Last sequence update:	June 7, 2005
Last modified:	December 14, 2011
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)