Q4ZY62 (Q4ZY62_PSEU2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pectate lyase EMBL AAY35910.1

Gene names

Ordered Locus Names:

Psyr_0852

Organism

Pseudomonas syringae pv. syringae (strain B728a) [Complete proteome] [HAMAP] EMBL AAY35910.1

Taxonomic identifier

205918 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae

Protein attributes

Sequence length	415 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL AAY35910.1
Molecular function	Lyase EMBL AAY35910.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 19	19	Potential EMBL AAY35910.1
	Chain	20 – 415	396	Potential EMBL AAY35910.1		PRO_5000000585

Sequences

	Sequence		Length	Mass (Da)
	Q4ZY62 [UniParc]. Last modified June 7, 2005. Version 1. Checksum: DEA79C4B565B3D4B	FASTA	415	44,675
	10 20 30 40 50 60 MRTILLTVLL VGAATAHATD YYVAPNGDDH AAGSKGAPLR TIMQAQQAAK AGDTVYFRGG 70 80 90 100 110 120 LYAYTAGINR CATRTDTVNA ITLNNSGSEN KPIRYWAYPG ETPVFDFSAM KDDCRVKGFN 130 140 150 160 170 180 VTGSWLHLKG LEVTGVPQQP ENHLNHESWG IWNSGSHNTF EQLNLHHNMG PGLFIQNGGY 190 200 210 220 230 240 NLVLNTDSHH NYDPYTSNGA GQSADGFGAH IKAGHPGNVF RGCRAWANSD DGFDLINAFS 250 260 270 280 290 300 PVTIESSWAW QQGYLPGTRT KLEAGNGNGI KAGGYGGKYV PDGVKHSVRN SVAFDNKSAG 310 320 330 340 350 360 FYANHHTLAL DFINNTAFAN GVNYNMAGIA PDGSLIPLGN LFNNIAYKGR LTVNTEGLDM 370 380 390 400 410 AHNSWTLPTP VTDADFEDVS DTGWDAPRQS DGSLPVLRSF HLRPGSRLAG MGAFH

References

[1]

"Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000." Feil H., Feil W.S., Chain P., Larimer F., Dibartolo G., Copeland A., Lykidis A., Trong S., Nolan M., Goltsman E., Thiel J., Malfatti S., Loper J.E., Lapidus A., Detter J.C., Land M., Richardson P.M., Kyrpides N.C., Ivanova N., Lindow S.E. Proc. Natl. Acad. Sci. U.S.A. 102:11064-11069(2005) [PubMed: 16043691] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000075 Genomic DNA. Translation: AAY35910.1.
RefSeq	YP_233948.1. NC_007005.1.
3D structure databases
ProteinModelPortal	Q4ZY62.
ModBase	Search...
Protein-protein interaction databases
STRING	Q4ZY62.
Protein family/group databases
CAZy	PL9. Polysaccharide Lyase Family 9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3366344.
GenomeReviews	Gene locus Psyr_0852 in contig CP000075_GR.
KEGG	psb:Psyr_0852.
NMPDR	fig|205918.4.peg.1173.
PATRIC	19982179. VBIPseSyr42314_0880.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG08018.
HOGENOM	HBG584769.
OMA	DSHHNYD.
ProtClustDB	CLSK412066.
Enzyme and pathway databases
BioCyc	PSYR205918:PSYR_0852-MONOMER.
Family and domain databases
InterPro	IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
SMART	SM00710. PbH1. 4 hits. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q4ZY62_PSEU2

Accession

Primary (citable) accession number: Q4ZY62

Entry history

Integrated into UniProtKB/TrEMBL:	June 7, 2005
Last sequence update:	June 7, 2005
Last modified:	December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)