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Protein
Submitted name:

Outer-membrane type III secretion protein HrcC

Gene

Psyr_1200

Organism
Pseudomonas syringae pv. syringae (strain B728a)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciPSYR205918:GJ94-1219-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Outer-membrane type III secretion protein HrcCImported
Gene namesi
Ordered Locus Names:Psyr_1200Imported
OrganismiPseudomonas syringae pv. syringae (strain B728a)Imported
Taxonomic identifieri205918 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonasPseudomonas syringae
Proteomesi
  • UP000000426 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence analysisAdd
BLAST
Chaini22 – 700679Sequence analysisPRO_5004247746Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi205918.Psyr_1200.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini175 – 319145Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiCOG1450. LUCA.
HOGENOMiHOG000270092.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4ZX68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKALMWLPL LLIGLSPATW AVTPEAWKHT AYAYDARQTE LATALADFAK
60 70 80 90 100
EFGMALDMPP IPGVLDDRIR AQSPEEFLDR LGQEYHFQWF VYNDTLYVSP
110 120 130 140 150
SSEHTSARIE VSSDAVDDLQ TALTDVGLLD KRFGWGVLPN EGVVLVRGPA
160 170 180 190 200
KYVELVRDYS KKVEAPEKGD KQDIIVFPLK YASAADRTIR YRDQQLVVAG
210 220 230 240 250
VASILQDLLD TRSRGGSING MDLLGRGGRG NGLAGGGSPD APSLPMSSSG
260 270 280 290 300
LDTNALEQGL DQVLHYGGGG KSAGKSRSGG RANIRVTADV RNNAVLIYDL
310 320 330 340 350
PSRKAMYEKL IKELDVSRNL IEIDAVILDI DRNELAELSS RWNFNAGSVN
360 370 380 390 400
GGANMFDAGT SSTLFIQNAG KFAAELHALE GNGSASVIGN PSILTLENQP
410 420 430 440 450
AVIDFSRTEY LTATSERVAN IEPITAGTSL QVTPRSLDHD GKPQVQLIVD
460 470 480 490 500
IEDGQIDISD INDTQPSVRK GNVSTQAVIA EHGSLVIGGF HGLEANDKVH
510 520 530 540 550
KVPLLGDIPY IGKLLFQSRS RELSQRERLF ILTPRLIGDQ VNPARYVQNG
560 570 580 590 600
NPHDVDDQMK RIKERRDGGE LPTRGDIQKV FTQMVDGAAP EGMHDGETLP
610 620 630 640 650
FETDSLCDPG QGLSLDGQRS QWYARKDWGV AVVVARNNTD KPVRIDESRC
660 670 680 690 700
GGRWVIGVAA WPHAWLQPGE ESEVYIAVRQ PQISKMAKES RPSLLRGAKP
Length:700
Mass (Da):76,432
Last modified:June 7, 2005 - v1
Checksum:i17D412B9C75439DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000075 Genomic DNA. Translation: AAY36254.1.
RefSeqiWP_011266883.1. NC_007005.1.
YP_234292.1. NC_007005.1.

Genome annotation databases

EnsemblBacteriaiAAY36254; AAY36254; Psyr_1200.
GeneIDi3366694.
KEGGipsb:Psyr_1200.
PATRICi19982891. VBIPseSyr42314_1234.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000075 Genomic DNA. Translation: AAY36254.1.
RefSeqiWP_011266883.1. NC_007005.1.
YP_234292.1. NC_007005.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi205918.Psyr_1200.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY36254; AAY36254; Psyr_1200.
GeneIDi3366694.
KEGGipsb:Psyr_1200.
PATRICi19982891. VBIPseSyr42314_1234.

Phylogenomic databases

eggNOGiCOG1450. LUCA.
HOGENOMiHOG000270092.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.

Enzyme and pathway databases

BioCyciPSYR205918:GJ94-1219-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ4ZX68_PSEU2
AccessioniPrimary (citable) accession number: Q4ZX68
Entry historyi
Integrated into UniProtKB/TrEMBL: June 7, 2005
Last sequence update: June 7, 2005
Last modified: September 7, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.