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Protein
Submitted name:

Copper resistance protein CopC

Gene

Psyr_1495

Organism
Pseudomonas syringae pv. syringae (strain B728a)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciPSYR205918:GJ94-1519-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Copper resistance protein CopCImported
Gene namesi
Ordered Locus Names:Psyr_1495Imported
OrganismiPseudomonas syringae pv. syringae (strain B728a)Imported
Taxonomic identifieri205918 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonasPseudomonas syringae
Proteomesi
  • UP000000426 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence analysisAdd
BLAST
Chaini25 – 126102Sequence analysisPRO_5004247432Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi205918.Psyr_1495.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1M42NMR-A25-126[»]
1NM4NMR-A25-126[»]
1OT4NMR-A25-126[»]
ProteinModelPortaliQ4ZWC7.
SMRiQ4ZWC7. Positions 25-126.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ4ZWC7.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini25 – 125101CopCInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105JDN. Bacteria.
COG2372. LUCA.
HOGENOMiHOG000127318.
KOiK07156.
OMAiGMADHAP.
OrthoDBiEOG6HJ27W.

Family and domain databases

Gene3Di2.60.40.1220. 1 hit.
InterProiIPR007348. CopC_dom.
IPR014755. Cu-Rt/internalin_Ig-like.
IPR014756. Ig_E-set.
[Graphical view]
PfamiPF04234. CopC. 1 hit.
[Graphical view]
SUPFAMiSSF81296. SSF81296. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4ZWC7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLNRTRFVT LFAAGMLVSA LAQAHPKLVS STPAEGSEGA APGKIELHFS
60 70 80 90 100
ENLVTQFSGA KLVMTAMPGM EHSPMGVKTA VSGGGDPKTM IITPASPLTA
110 120
GTYKVDWRAV SSDTHPITGS VTFKVK
Length:126
Mass (Da):13,127
Last modified:June 7, 2005 - v1
Checksum:i354BA502FB46701B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000075 Genomic DNA. Translation: AAY36545.1.
RefSeqiWP_011267052.1. NC_007005.1.
YP_234583.1. NC_007005.1.

Genome annotation databases

EnsemblBacteriaiAAY36545; AAY36545; Psyr_1495.
GeneIDi3366994.
KEGGipsb:Psyr_1495.
PATRICi19983487. VBIPseSyr42314_1527.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000075 Genomic DNA. Translation: AAY36545.1.
RefSeqiWP_011267052.1. NC_007005.1.
YP_234583.1. NC_007005.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1M42NMR-A25-126[»]
1NM4NMR-A25-126[»]
1OT4NMR-A25-126[»]
ProteinModelPortaliQ4ZWC7.
SMRiQ4ZWC7. Positions 25-126.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi205918.Psyr_1495.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY36545; AAY36545; Psyr_1495.
GeneIDi3366994.
KEGGipsb:Psyr_1495.
PATRICi19983487. VBIPseSyr42314_1527.

Phylogenomic databases

eggNOGiENOG4105JDN. Bacteria.
COG2372. LUCA.
HOGENOMiHOG000127318.
KOiK07156.
OMAiGMADHAP.
OrthoDBiEOG6HJ27W.

Enzyme and pathway databases

BioCyciPSYR205918:GJ94-1519-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ4ZWC7.

Family and domain databases

Gene3Di2.60.40.1220. 1 hit.
InterProiIPR007348. CopC_dom.
IPR014755. Cu-Rt/internalin_Ig-like.
IPR014756. Ig_E-set.
[Graphical view]
PfamiPF04234. CopC. 1 hit.
[Graphical view]
SUPFAMiSSF81296. SSF81296. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Solution structure of CopC: a cupredoxin-like protein involved in copper homeostasis."
    Arnesano F., Banci L., Bertini I., Thompsett A.R.
    Structure 10:1337-1347(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR OF 25-126.
  2. "A strategy for the NMR characterization of type II copper(II) proteins: the case of the copper trafficking protein CopC from Pseudomonas Syringae."
    Arnesano F., Banci L., Bertini I., Felli I.C., Luchinat C., Thompsett A.R.
    J. Am. Chem. Soc. 125:7200-7208(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR OF 25-126.
  3. "A redox switch in CopC: an intriguing copper trafficking protein that binds copper(I) and copper(II) at different sites."
    Arnesano F., Banci L., Bertini I., Mangani S., Thompsett A.R.
    Proc. Natl. Acad. Sci. U.S.A. 100:3814-3819(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR OF 25-126.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B728aImported.

Entry informationi

Entry nameiQ4ZWC7_PSEU2
AccessioniPrimary (citable) accession number: Q4ZWC7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 7, 2005
Last sequence update: June 7, 2005
Last modified: March 16, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.