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Protein
Submitted name:

DNA polymerase III, delta prime subunit

Gene

Psyr_1653

Organism
Pseudomonas syringae pv. syringae (strain B728a)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. 3'-5' exonuclease activity Source: InterPro
  2. DNA-directed DNA polymerase activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA replication Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyciPSYR205918:GJ94-1680-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase III, delta prime subunitImported (EC:2.7.7.7Imported)
Gene namesi
Ordered Locus Names:Psyr_1653Imported
OrganismiPseudomonas syringae pv. syringae (strain B728a)Imported
Taxonomic identifieri205918 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonasPseudomonas syringae
ProteomesiUP000000426: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi205918.Psyr_1653.

Structurei

3D structure databases

ProteinModelPortaliQ4ZVX1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0470.
HOGENOMiHOG000192592.
KOiK02341.
OMAiDWFCDWS.
OrthoDBiEOG6W9X5M.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR004622. DNA_pol_HolB.
IPR027417. P-loop_NTPase.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00678. holB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4ZVX1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAEAYPWQAS LWQQMAGRAQ HAHAYLLHGP AGIGKRALAE RLMASLLCKT
60 70 80 90 100
PEGLDACGHC KSCLLLAAGS HPDNYVLEPE EADKPIKVDQ VRDLVSFVVQ
110 120 130 140 150
TAQMGGRKVV LVEPVEAMNT NAANALLKSL EEPSGNTVLL LVSHQPSRLL
160 170 180 190 200
PTVKSRCVQQ ACPLPGEQMS LDWLSGALPD CTQDERFELL TLAAGSPLAA
210 220 230 240 250
VALHTQGVRE QRALVVDGVK KLLKQQQSAT QLAEGWKDIP LLLLFDWFCD
260 270 280 290 300
WSHLILRYQM TQDEEGLGLG DMRKVIQYLA QKSSRAKVLE IQDWILAQRQ
310 320
KVMSKANLNR VLLLEALLVQ WAGLPGQA
Length:328
Mass (Da):36,104
Last modified:June 7, 2005 - v1
Checksum:iBAFFA9630C5E46AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000075 Genomic DNA. Translation: AAY36701.1.
RefSeqiYP_234739.1. NC_007005.1.

Genome annotation databases

EnsemblBacteriaiAAY36701; AAY36701; Psyr_1653.
GeneIDi3367155.
KEGGipsb:Psyr_1653.
PATRICi19983819. VBIPseSyr42314_1690.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000075 Genomic DNA. Translation: AAY36701.1.
RefSeqiYP_234739.1. NC_007005.1.

3D structure databases

ProteinModelPortaliQ4ZVX1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi205918.Psyr_1653.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY36701; AAY36701; Psyr_1653.
GeneIDi3367155.
KEGGipsb:Psyr_1653.
PATRICi19983819. VBIPseSyr42314_1690.

Phylogenomic databases

eggNOGiCOG0470.
HOGENOMiHOG000192592.
KOiK02341.
OMAiDWFCDWS.
OrthoDBiEOG6W9X5M.

Enzyme and pathway databases

BioCyciPSYR205918:GJ94-1680-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR004622. DNA_pol_HolB.
IPR027417. P-loop_NTPase.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00678. holB. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B728aImported.

Entry informationi

Entry nameiQ4ZVX1_PSEU2
AccessioniPrimary (citable) accession number: Q4ZVX1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 7, 2005
Last sequence update: June 7, 2005
Last modified: January 7, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.