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Protein
Submitted name:

Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region

Gene

Psyr_2997

Organism
Pseudomonas syringae pv. syringae (strain B728a)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseSAAS annotation, Hydrolase

Enzyme and pathway databases

BioCyciPSYR205918:G1G4J-3042-MONOMER.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic regionImported
Gene namesi
Ordered Locus Names:Psyr_2997Imported
OrganismiPseudomonas syringae pv. syringae (strain B728a)Imported
Taxonomic identifieri205918 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonasPseudomonas syringae
Proteomesi
  • UP000000426 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi205918.Psyr_2997.

Structurei

3D structure databases

ProteinModelPortaliQ4ZS41.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini182 – 592AamyInterPro annotationAdd BLAST411

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4108IUM. Bacteria.
COG1523. LUCA.
HOGENOMiHOG000239197.
KOiK01214.
OMAiHAFVNDQ.
OrthoDBiPOG091H0DZH.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
InterProiView protein in InterPro
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013780. Glyco_hydro_b.
IPR011837. Glycogen_debranch_GlgX.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF02922. CBM_48. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR02100. glgX_debranch. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4ZS41-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTKSTTPAE DNSAPLDNPG STPSRIREGL PFPLGASWDG LGVNFALFSA
60 70 80 90 100
NATKVELCLF DSTGEIELER IELPEYTDEI YHGYLPDAHP GQIYGYRVYG
110 120 130 140 150
PYDPKNGHRF NHNKLLIDPY AKQLVGELKW SEALFGYTIG HPDGDLSFDE
160 170 180 190 200
RDSAPFVPKS KVIDEAYTWG RDQRVGTPWD KTIFYETHVR GITMRHPEVA
210 220 230 240 250
EELRGTFAGL GSAPVVEHIR KLGVTSVELL PIHAFVNDQH LLQKGMTNYW
260 270 280 290 300
GYNSIAFFAP DPRYLASGKI AEFKEMVAHL HHAGLEVILD VVYNHTAEGN
310 320 330 340 350
ELGPTLSMRG IDNASYYRLM PDDKRYYIND SGTGNTLDLS HPCVLQMVTD
360 370 380 390 400
SLRYWASEMH VDGFRFDLAT ILGRYHDGFD ERHSFLVACR QDPVLRQVKL
410 420 430 440 450
VAEPWDCGPG GYQVGGFPPG WMEWNDKFRD TVRAFWKGDE AQLADFAARM
460 470 480 490 500
TASGNMFNQR GRRPQASVNF ITAHDGFTLH DLVSYNDKHN EANDENNQDG
510 520 530 540 550
SNNNLSWNHG VEGPTEDPEI NSLRLRQMRN FFATLLLAQG TPMIVAGDEF
560 570 580 590 600
ARTQHGNNNA YCQDSEIGWI NWDLDEDGEA LLKFVTRVIK LRQTYPILRR
610 620 630 640 650
SRFLVGDYNE EIGVKDVTWL APDGNEMSVE QWHDANGRCL GMLMDGRAQE
660 670 680 690 700
TGIRRAGADA TLLLVVNAHH DGVNFTLPEV PEGTHYECLI DTNQDDARSK
710 720
EHFAFGSQYT VTPRSLLLFE LKREDQQ
Length:727
Mass (Da):82,106
Last modified:June 7, 2005 - v1
Checksum:i11C143006DBA637D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000075 Genomic DNA. Translation: AAY38031.1.
RefSeqiWP_011268142.1. NC_007005.1.
YP_236069.1. NC_007005.1.

Genome annotation databases

EnsemblBacteriaiAAY38031; AAY38031; Psyr_2997.
GeneIDi3368517.
KEGGipsb:Psyr_2997.
PATRICifig|205918.7.peg.3058.

Similar proteinsi

Entry informationi

Entry nameiQ4ZS41_PSEU2
AccessioniPrimary (citable) accession number: Q4ZS41
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2005
Last sequence update: June 7, 2005
Last modified: February 28, 2018
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported