Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

3'-5' exoribonuclease Csl4 homolog, putative

Gene

PB000371.01.0

Organism
Plasmodium berghei (strain Anka)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
3'-5' exoribonuclease Csl4 homolog, putativeImported
Gene namesi
ORF Names:PB000371.01.0Imported, PBANKA_061750Imported
OrganismiPlasmodium berghei (strain Anka)Imported
Taxonomic identifieri5823 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Vinckeia)
Proteomesi
  • UP000007720 Componenti: Unassembled WGS sequence
  • UP000074855 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiPlasmoDB:PBANKA_0617500.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini63 – 14381S1InterPro annotationAdd
BLAST

Phylogenomic databases

HOGENOMiHOG000177330.
KOiK07573.

Family and domain databases

InterProiIPR019495. EXOSC1.
IPR025721. Exosome_cplx_N_dom.
IPR012340. NA-bd_OB-fold.
IPR022967. S1_dom.
[Graphical view]
PfamiPF14382. ECR1_N. 1 hit.
PF10447. EXOSC1. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4Z1I0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDNIVLPGEV VGNINNYISG NNTYILNNEI RSTILGKKNI SINNENKQII
60 70 80 90 100
NIDVIKDYTP LPQVGDLVIC KVYRVTFNMI YCNIMLTNNK PLKNSLKGYI
110 120 130 140 150
NKSDIHIYEG DLGDNFDCFK QGDIIKAKVL SIGQHSSYKL STVGSDLGVI
160 170 180 190
IALSEKGDIL QPAAWNLMVN LSDMSFEQRK VSNEFSFPCN DYMS
Length:194
Mass (Da):21,752
Last modified:July 5, 2005 - v1
Checksum:iAA806EAEBED5F736
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAAI01001135 Genomic DNA. Translation: CAH95860.1.
LK023121 Genomic DNA. Translation: CDS45549.1.
RefSeqiXP_676711.1. XM_671619.1.

Genome annotation databases

EnsemblProtistsiCAH95860; CAH95860; PB000371.01.0.
PBANKA_061750:mRNA; PBANKA_061750:pep; PBANKA_061750.
GeneIDi3425221.
KEGGipbe:PB000371.01.0.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAAI01001135 Genomic DNA. Translation: CAH95860.1.
LK023121 Genomic DNA. Translation: CDS45549.1.
RefSeqiXP_676711.1. XM_671619.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiCAH95860; CAH95860; PB000371.01.0.
PBANKA_061750:mRNA; PBANKA_061750:pep; PBANKA_061750.
GeneIDi3425221.
KEGGipbe:PB000371.01.0.

Organism-specific databases

EuPathDBiPlasmoDB:PBANKA_0617500.

Phylogenomic databases

HOGENOMiHOG000177330.
KOiK07573.

Family and domain databases

InterProiIPR019495. EXOSC1.
IPR025721. Exosome_cplx_N_dom.
IPR012340. NA-bd_OB-fold.
IPR022967. S1_dom.
[Graphical view]
PfamiPF14382. ECR1_N. 1 hit.
PF10447. EXOSC1. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ4Z1I0_PLABA
AccessioniPrimary (citable) accession number: Q4Z1I0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2005
Last sequence update: July 5, 2005
Last modified: June 8, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.