Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q4Z1I0

- Q4Z1I0_PLABA

UniProt

Q4Z1I0 - Q4Z1I0_PLABA

Protein
Submitted name:

3'-5' exoribonuclease Csl4 homolog, putative

Gene

PB000371.01.0

Organism
Plasmodium berghei (strain Anka)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (05 Jul 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    3'-5' exoribonuclease Csl4 homolog, putativeImported
    Gene namesi
    ORF Names:PB000371.01.0Imported
    OrganismiPlasmodium berghei (strain Anka)Imported
    Taxonomic identifieri5823 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiumPlasmodium (Vinckeia)
    ProteomesiUP000007720: Unassembled WGS sequence

    Organism-specific databases

    EuPathDBiPlasmoDB:PBANKA_061750.

    Subcellular locationi

    GO - Cellular componenti

    1. exosome (RNase complex) Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliQ4Z1I0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000177330.
    KOiK07573.

    Family and domain databases

    InterProiIPR019495. EXOSC1.
    IPR025721. Exosome_cplx_N_dom.
    IPR012340. NA-bd_OB-fold.
    IPR022967. RNA-binding_domain_S1.
    [Graphical view]
    PfamiPF14382. ECR1_N. 1 hit.
    PF10447. EXOSC1. 1 hit.
    [Graphical view]
    SMARTiSM00316. S1. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q4Z1I0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDNIVLPGEV VGNINNYISG NNTYILNNEI RSTILGKKNI SINNENKQII    50
    NIDVIKDYTP LPQVGDLVIC KVYRVTFNMI YCNIMLTNNK PLKNSLKGYI 100
    NKSDIHIYEG DLGDNFDCFK QGDIIKAKVL SIGQHSSYKL STVGSDLGVI 150
    IALSEKGDIL QPAAWNLMVN LSDMSFEQRK VSNEFSFPCN DYMS 194
    Length:194
    Mass (Da):21,752
    Last modified:July 5, 2005 - v1
    Checksum:iAA806EAEBED5F736
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CAAI01001135 Genomic DNA. Translation: CAH95860.1.
    RefSeqiXP_676711.1. XM_671619.1.

    Genome annotation databases

    EnsemblProtistsiPBANKA_061750:mRNA; PBANKA_061750:pep; PBANKA_061750.
    GeneIDi3425221.
    KEGGipbe:PB000371.01.0.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CAAI01001135 Genomic DNA. Translation: CAH95860.1 .
    RefSeqi XP_676711.1. XM_671619.1.

    3D structure databases

    ProteinModelPortali Q4Z1I0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi PBANKA_061750:mRNA ; PBANKA_061750:pep ; PBANKA_061750 .
    GeneIDi 3425221.
    KEGGi pbe:PB000371.01.0.

    Organism-specific databases

    EuPathDBi PlasmoDB:PBANKA_061750.

    Phylogenomic databases

    HOGENOMi HOG000177330.
    KOi K07573.

    Family and domain databases

    InterProi IPR019495. EXOSC1.
    IPR025721. Exosome_cplx_N_dom.
    IPR012340. NA-bd_OB-fold.
    IPR022967. RNA-binding_domain_S1.
    [Graphical view ]
    Pfami PF14382. ECR1_N. 1 hit.
    PF10447. EXOSC1. 1 hit.
    [Graphical view ]
    SMARTi SM00316. S1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ANKAImported.

    Entry informationi

    Entry nameiQ4Z1I0_PLABA
    AccessioniPrimary (citable) accession number: Q4Z1I0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2005
    Last sequence update: July 5, 2005
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3