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Q4Z1I0

- Q4Z1I0_PLABA

UniProt

Q4Z1I0 - Q4Z1I0_PLABA

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Protein
Submitted name:

3'-5' exoribonuclease Csl4 homolog, putative

Gene

PB000371.01.0

Organism
Plasmodium berghei (strain Anka)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
3'-5' exoribonuclease Csl4 homolog, putativeImported
Gene namesi
ORF Names:PB000371.01.0Imported, PBANKA_061750Imported
OrganismiPlasmodium berghei (strain Anka)Imported
Taxonomic identifieri5823 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiumPlasmodium (Vinckeia)
ProteomesiUP000007720: Unassembled WGS sequence

Organism-specific databases

EuPathDBiPlasmoDB:PBANKA_061750.

Subcellular locationi

GO - Cellular componenti

  1. exosome (RNase complex) Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ4Z1I0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000177330.
InParanoidiQ4Z1I0.
KOiK07573.

Family and domain databases

InterProiIPR019495. EXOSC1.
IPR025721. Exosome_cplx_N_dom.
IPR012340. NA-bd_OB-fold.
IPR022967. S1_dom.
[Graphical view]
PfamiPF14382. ECR1_N. 1 hit.
PF10447. EXOSC1. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4Z1I0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDNIVLPGEV VGNINNYISG NNTYILNNEI RSTILGKKNI SINNENKQII
60 70 80 90 100
NIDVIKDYTP LPQVGDLVIC KVYRVTFNMI YCNIMLTNNK PLKNSLKGYI
110 120 130 140 150
NKSDIHIYEG DLGDNFDCFK QGDIIKAKVL SIGQHSSYKL STVGSDLGVI
160 170 180 190
IALSEKGDIL QPAAWNLMVN LSDMSFEQRK VSNEFSFPCN DYMS
Length:194
Mass (Da):21,752
Last modified:July 5, 2005 - v1
Checksum:iAA806EAEBED5F736
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAAI01001135 Genomic DNA. Translation: CAH95860.1.
LK023121 Genomic DNA. Translation: CDS45549.1.
RefSeqiXP_676711.1. XM_671619.1.

Genome annotation databases

EnsemblProtistsiPBANKA_061750:mRNA; PBANKA_061750:pep; PBANKA_061750.
GeneIDi3425221.
KEGGipbe:PB000371.01.0.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAAI01001135 Genomic DNA. Translation: CAH95860.1 .
LK023121 Genomic DNA. Translation: CDS45549.1 .
RefSeqi XP_676711.1. XM_671619.1.

3D structure databases

ProteinModelPortali Q4Z1I0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi PBANKA_061750:mRNA ; PBANKA_061750:pep ; PBANKA_061750 .
GeneIDi 3425221.
KEGGi pbe:PB000371.01.0.

Organism-specific databases

EuPathDBi PlasmoDB:PBANKA_061750.

Phylogenomic databases

HOGENOMi HOG000177330.
InParanoidi Q4Z1I0.
KOi K07573.

Family and domain databases

InterProi IPR019495. EXOSC1.
IPR025721. Exosome_cplx_N_dom.
IPR012340. NA-bd_OB-fold.
IPR022967. S1_dom.
[Graphical view ]
Pfami PF14382. ECR1_N. 1 hit.
PF10447. EXOSC1. 1 hit.
[Graphical view ]
SMARTi SM00316. S1. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ANKAImported.
  2. Aslett A.Martin., De Silva Nishadi
    Submitted (MAY-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ANKAImported.

Entry informationi

Entry nameiQ4Z1I0_PLABA
AccessioniPrimary (citable) accession number: Q4Z1I0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2005
Last sequence update: July 5, 2005
Last modified: October 29, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3