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Q4Z1I0

- Q4Z1I0_PLABA

UniProt

Q4Z1I0 - Q4Z1I0_PLABA

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Protein
Submitted name:

3'-5' exoribonuclease Csl4 homolog, putative

Gene
PB000371.01.0
Organism
Plasmodium berghei (strain Anka)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
3'-5' exoribonuclease Csl4 homolog, putativeImported
Gene namesi
ORF Names:PB000371.01.0Imported
OrganismiPlasmodium berghei (strain Anka)
Taxonomic identifieri5823 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiumPlasmodium (Vinckeia)
ProteomesiUP000007720: Unassembled WGS sequence

Organism-specific databases

EuPathDBiPlasmoDB:PBANKA_061750.

Subcellular locationi

GO - Cellular componenti

  1. exosome (RNase complex) Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ4Z1I0.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000177330.
KOiK07573.

Family and domain databases

InterProiIPR019495. EXOSC1.
IPR025721. Exosome_cplx_N_dom.
IPR012340. NA-bd_OB-fold.
IPR022967. RNA-binding_domain_S1.
[Graphical view]
PfamiPF14382. ECR1_N. 1 hit.
PF10447. EXOSC1. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4Z1I0-1 [UniParc]FASTAAdd to Basket

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MDNIVLPGEV VGNINNYISG NNTYILNNEI RSTILGKKNI SINNENKQII    50
NIDVIKDYTP LPQVGDLVIC KVYRVTFNMI YCNIMLTNNK PLKNSLKGYI 100
NKSDIHIYEG DLGDNFDCFK QGDIIKAKVL SIGQHSSYKL STVGSDLGVI 150
IALSEKGDIL QPAAWNLMVN LSDMSFEQRK VSNEFSFPCN DYMS 194
Length:194
Mass (Da):21,752
Last modified:July 5, 2005 - v1
Checksum:iAA806EAEBED5F736
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CAAI01001135 Genomic DNA. Translation: CAH95860.1.
RefSeqiXP_676711.1. XM_671619.1.

Genome annotation databases

EnsemblProtistsiPBANKA_061750:mRNA; PBANKA_061750:pep; PBANKA_061750.
GeneIDi3425221.
KEGGipbe:PB000371.01.0.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CAAI01001135 Genomic DNA. Translation: CAH95860.1 .
RefSeqi XP_676711.1. XM_671619.1.

3D structure databases

ProteinModelPortali Q4Z1I0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi PBANKA_061750:mRNA ; PBANKA_061750:pep ; PBANKA_061750 .
GeneIDi 3425221.
KEGGi pbe:PB000371.01.0.

Organism-specific databases

EuPathDBi PlasmoDB:PBANKA_061750.

Phylogenomic databases

HOGENOMi HOG000177330.
KOi K07573.

Family and domain databases

InterProi IPR019495. EXOSC1.
IPR025721. Exosome_cplx_N_dom.
IPR012340. NA-bd_OB-fold.
IPR022967. RNA-binding_domain_S1.
[Graphical view ]
Pfami PF14382. ECR1_N. 1 hit.
PF10447. EXOSC1. 1 hit.
[Graphical view ]
SMARTi SM00316. S1. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ANKA.

Entry informationi

Entry nameiQ4Z1I0_PLABA
AccessioniPrimary (citable) accession number: Q4Z1I0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2005
Last sequence update: July 5, 2005
Last modified: December 11, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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