Q4Z1I0 (Q4Z1I0_PLABA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
3'-5' exoribonuclease Csl4 homolog, putative EMBL CAH95860.1

Gene names

ORF Names:

PB000371.01.0 EMBL CAH95860.1

Organism

Plasmodium berghei (strain Anka) [Reference proteome]

Taxonomic identifier

5823 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Alveolata › Apicomplexa › Aconoidasida › Haemosporida › Plasmodium › Plasmodium (Vinckeia) › Plasmodium berghei

Protein attributes

Sequence length	194 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	exosome (RNase complex) Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q4Z1I0 [UniParc]. Last modified July 5, 2005. Version 1. Checksum: AA806EAEBED5F736	FASTA	194	21,752
	10 20 30 40 50 60 MDNIVLPGEV VGNINNYISG NNTYILNNEI RSTILGKKNI SINNENKQII NIDVIKDYTP 70 80 90 100 110 120 LPQVGDLVIC KVYRVTFNMI YCNIMLTNNK PLKNSLKGYI NKSDIHIYEG DLGDNFDCFK 130 140 150 160 170 180 QGDIIKAKVL SIGQHSSYKL STVGSDLGVI IALSEKGDIL QPAAWNLMVN LSDMSFEQRK 190 VSNEFSFPCN DYMS

References

[1]

"A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses." Hall N., Karras M., Raine J.D., Carlton J.M., Kooij T.W.A., Berriman M., Florens L., Janssen C.S., Pain A., Christophides G.K., James K., Rutherford K., Harris B., Harris D., Churcher C.M., Quail M.A., Ormond D., Doggett J. , Trueman H.E., Mendoza J., Bidwell S.L., Rajandream M.A., Carucci D.J., Yates J.R. III, Kafatos F.C., Janse C.J., Barrell B.G., Turner C.M.R., Waters A.P., Sinden R.S. Science 307:82-86(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ANKA.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CAAI01001135 Genomic DNA. Translation: CAH95860.1.
RefSeq	XP_676711.1. XM_671619.1.
3D structure databases
ProteinModelPortal	Q4Z1I0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	PBANKA_061750:mRNA; PBANKA_061750:pep; PBANKA_061750.
GeneID	3425221.
KEGG	pbe:PB000371.01.0.
Organism-specific databases
EuPathDB	PlasmoDB:PBANKA_061750.
Phylogenomic databases
HOGENOM	HOG000177330.
KO	K07573.
Family and domain databases
InterPro	IPR019495. EXOSC1. IPR025721. Exosome_cplx_N_dom. IPR022967. RNA-binding_domain_S1. [Graphical view]
Pfam	PF14382. ECR1_N. 1 hit. PF10447. EXOSC1. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q4Z1I0_PLABA

Accession

Primary (citable) accession number: Q4Z1I0

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2005
Last sequence update:	July 5, 2005
Last modified:	March 6, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)