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Q4Y3G9 (Q4Y3G9_PLACH) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA ligase RuleBase RU000617

EC=6.5.1.1 RuleBase RU000617
Gene names
ORF Names:PC000404.01.0 EMBL CAH76291.1
OrganismPlasmodium chabaudi [Reference proteome]
Taxonomic identifier5825 [NCBI]
Taxonomic lineageEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiumPlasmodium (Vinckeia)

Protein attributes

Sequence length433 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CAH76291.1

Sequences

Sequence LengthMass (Da)Tools
Q4Y3G9 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 9249090F9A24FB8C

FASTA43349,312
        10         20         30         40         50         60 
YCDVNNDSDI FECMEKSVKS ALCELPNIEM IIQNLLNGDD MNVLMKKCTV KTGVPVQPML 

        70         80         90        100        110        120 
AKPTKGIQEV LDRFNNVTFT CEYKYDGERA QIHYIDKDNI KIFSRNLETM TEKYPDVIQI 

       130        140        150        160        170        180 
VKDQIMPGVT ESIIDSEVVA YDIENKKILP FQILTTRKRK DVDIENIKVK ICLFPFDLIC 

       190        200        210        220        230        240 
CNGVPVIKEP LEIRRKLLYS LLKCKEGVLE YATHSEMNNI EDIDMFLQDA IENSCEGLMV 

       250        260        270        280        290        300 
KTLLDNASYE PSRRSLNWLK VKKDYIEGLS DSVDLVPIAG YYGKGKRSGV YGAFVLAAYN 

       310        320        330        340        350        360 
SETENFQTVC KAGTGFSDEI LNALHESLSD KIIPNKKSYY EVSDKLNPDV WFDAHYVWEI 

       370        380        390        400        410        420 
KAADLSLSPV HTAAIGVYSD DKGIGLRFPR FLRLRDDKNP EQATTTQQIV EFYEAQFASN 

       430 
KNKNNYNDDS GSE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CAAJ01001348 Genomic DNA. Translation: CAH76291.1.
RefSeqXP_743454.1. XM_738361.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3496557.
KEGGpcb:PC000404.01.0.

Organism-specific databases

EuPathDBPlasmoDB:PCHAS_140450.

Phylogenomic databases

HOGENOMHOG000036006.
KOK10747.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ4Y3G9_PLACH
AccessionPrimary (citable) accession number: Q4Y3G9
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2005
Last sequence update: July 5, 2005
Last modified: October 16, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)