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Q4X1R8 (Q4X1R8_ASPFU) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length909 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EAL93197.1

Sequences

Sequence LengthMass (Da)Tools
Q4X1R8 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 6CDE7B011111C58B

FASTA909100,836
        10         20         30         40         50         60 
MTILRISASI APVSHYCRGP VAFTPKARIS HRTSLRTFTG YTRPPFLSGA TRSVVSTTHC 

        70         80         90        100        110        120 
SFAITTLPTM ADSKGRKQAT LGRFFGSNAE GPKTAPKKQT TLSFSSKKDK KSDVVDEQAE 

       130        140        150        160        170        180 
AREFSGIPEA KSEPANSEDV KMEDLSETEV AHMNGSPGSK SLKREKSSDE ESDSDVQPLQ 

       190        200        210        220        230        240 
KRRRKSSRGA EAAPTIRRES PSPMISEISK AEVKESSPPA ILKKASGEET PEKETEHSEE 

       250        260        270        280        290        300 
EEVATASEEE DEDEKPEVMK KTMEKVQATL KATGTEPYPD WKPGEPVPYA ALCKTFSLIE 

       310        320        330        340        350        360 
MTTKRLIILA HCSLFLRQVL RLTPQDLLPT VQLMINKLAA DYAGIELGIG ESFIMKAIGE 

       370        380        390        400        410        420 
STGRSLAVIK ADQHEIGDLG LVAAKSRSNQ PTMFKPKPLT VRGVHEGLIA IAKIQGQGSQ 

       430        440        450        460        470        480 
DKKISAIKKL LEAKFIVRFL EGKLRLGLAE KTVLVALAQA VVAHEAAVRG EKTPSPEKMA 

       490        500        510        520        530        540 
QGEAVLKTVY SELPAYEVII PAMLEHGLFN LPKVCKLQPG IPIKPMLAKP TKSITEVLNR 

       550        560        570        580        590        600 
FEGKNFTCEY KYDGERAQIH YDSKGLSAIF SRNSEDLSKK YPDVLAKLET WVKDGVKSFV 

       610        620        630        640        650        660 
LDCETVAWDT VNKKVLPFQQ LMTRKRKDVK AEDVKVKVCI FAFDLLFLNG EPTVKKTLRE 

       670        680        690        700        710        720 
RRELLHKSFE VVEGEFQFAQ HGDTNDLEEI QNLLDESVKA SCEGLMVKML DTEESGYEPS 

       730        740        750        760        770        780 
KRSRNWLKVK KDYLAGVGDS LDLVVLGAYY GRGKRTSVYG AFLLAAYNSS TQTYETICNI 

       790        800        810        820        830        840 
GTGFSEALLE ELYKELSPLT IDRPKPFYSH SNVPKDQPDV WFEPRLVWEV KTADLTLSPR 

       850        860        870        880        890        900 
YKAAADEFVG TAGGGKGVSL RFPRFIKSRD DKKPEQATTT RAVAEMYRKQ EAVLKENTSK 


GGVDDDFEY

« Hide

References

[1]"Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus."
Nierman W.C., Pain A., Anderson M.J., Wortman J.R., Kim H.S., Arroyo J., Berriman M., Abe K., Archer D.B., Bermejo C., Bennett J.W., Bowyer P., Chen D., Collins M., Coulsen R., Davies R., Dyer P.S., Farman M.L. expand/collapse author list , Fedorova N., Fedorova N.D., Feldblyum T.V., Fischer R., Fosker N., Fraser A., Garcia J.L., Garcia M.J., Goble A., Goldman G.H., Gomi K., Griffith-Jones S., Gwilliam R., Haas B.J., Haas H., Harris D.E., Horiuchi H., Huang J., Humphray S., Jimenez J., Keller N., Khouri H., Kitamoto K., Kobayashi T., Konzack S., Kulkarni R., Kumagai T., Lafton A., Latge J.-P., Li W., Lord A., Lu C., Majoros W.H., May G.S., Miller B.L., Mohamoud Y., Molina M., Monod M., Mouyna I., Mulligan S., Murphy L.D., O'Neil S., Paulsen I., Penalva M.A., Pertea M., Price C., Pritchard B.L., Quail M.A., Rabbinowitsch E., Rawlins N., Rajandream M.A., Reichard U., Renauld H., Robson G.D., Rodriguez de Cordoba S., Rodriguez-Pena J.M., Ronning C.M., Rutter S., Salzberg S.L., Sanchez M., Sanchez-Ferrero J.C., Saunders D., Seeger K., Squares R., Squares S., Takeuchi M., Tekaia F., Turner G., Vazquez de Aldana C.R., Weidman J., White O., Woodward J.R., Yu J.-H., Fraser C.M., Galagan J.E., Asai K., Machida M., Hall N., Barrell B.G., Denning D.W.
Nature 438:1151-1156(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AAHF01000001 Genomic DNA. Translation: EAL93197.1.
RefSeqXP_755235.1. XM_750142.1.

3D structure databases

ProteinModelPortalQ4X1R8.
ModBaseSearch...

Protein-protein interaction databases

STRING5085.CADAFUAP00004733.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiCADAFUAT00004733; CADAFUAP00004733; CADAFUAG00004733.
GeneID3513117.
KEGGafm:AFUA_2G09010.

Phylogenomic databases

HOGENOMHOG000036006.
KOK10747.
OMAETICNIG.
OrthoDBEOG4RV60K.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
SSF117018. SSF117018. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ4X1R8_ASPFU
AccessionPrimary (citable) accession number: Q4X1R8
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2005
Last sequence update: July 5, 2005
Last modified: April 3, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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