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Protein

Immediate early response 3-interacting protein 1

Gene

ier3ip1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

May be involved in protein transport between endoplasmic reticulum and Golgi apparatus.By similarity

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Immediate early response 3-interacting protein 1
Gene namesi
Name:ier3ip1By similarity
ORF Names:zgc:112367
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 10

Organism-specific databases

ZFINiZDB-GENE-050506-106. ier3ip1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei2 – 22HelicalSequence analysisAdd BLAST21
Transmembranei62 – 82HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002579641 – 82Immediate early response 3-interacting protein 1Add BLAST82

Proteomic databases

PaxDbiQ4VBI2.

Expressioni

Gene expression databases

BgeeiENSDARG00000039601.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000057864.

Family & Domainsi

Sequence similaritiesi

Belongs to the YOS1 family.Sequence analysis

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG4779. Eukaryota.
ENOG4111WBM. LUCA.
GeneTreeiENSGT00510000047648.
HOGENOMiHOG000192480.
HOVERGENiHBG081806.
InParanoidiQ4VBI2.
OMAiAVNSVCI.
OrthoDBiEOG091G191B.
PhylomeDBiQ4VBI2.
TreeFamiTF300263.

Family and domain databases

InterProiView protein in InterPro
IPR013880. Yos1.
PANTHERiPTHR15858. PTHR15858. 1 hit.
PfamiView protein in Pfam
PF08571. Yos1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4VBI2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFTLYALIQ TAILFTNAIA VLHEERFLSK IGWGAEQGVG GFGDDPGIKA
60 70 80
QLLNLIRSVR TVMRVPLIAV NSVCIVLLLL FG
Length:82
Mass (Da):8,886
Last modified:July 5, 2005 - v1
Checksum:i18B1F2EA00334C67
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC095786 mRNA. Translation: AAH95786.1.
RefSeqiNP_001239302.1. NM_001252373.3.
UniGeneiDr.2869.

Genome annotation databases

EnsembliENSDART00000057865; ENSDARP00000057864; ENSDARG00000039601.
GeneIDi554110.
KEGGidre:554110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC095786 mRNA. Translation: AAH95786.1.
RefSeqiNP_001239302.1. NM_001252373.3.
UniGeneiDr.2869.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000057864.

Proteomic databases

PaxDbiQ4VBI2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000057865; ENSDARP00000057864; ENSDARG00000039601.
GeneIDi554110.
KEGGidre:554110.

Organism-specific databases

CTDi51124.
ZFINiZDB-GENE-050506-106. ier3ip1.

Phylogenomic databases

eggNOGiKOG4779. Eukaryota.
ENOG4111WBM. LUCA.
GeneTreeiENSGT00510000047648.
HOGENOMiHOG000192480.
HOVERGENiHBG081806.
InParanoidiQ4VBI2.
OMAiAVNSVCI.
OrthoDBiEOG091G191B.
PhylomeDBiQ4VBI2.
TreeFamiTF300263.

Miscellaneous databases

PROiQ4VBI2.

Gene expression databases

BgeeiENSDARG00000039601.

Family and domain databases

InterProiView protein in InterPro
IPR013880. Yos1.
PANTHERiPTHR15858. PTHR15858. 1 hit.
PfamiView protein in Pfam
PF08571. Yos1. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiIR3IP_DANRE
AccessioniPrimary (citable) accession number: Q4VBI2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 5, 2005
Last modified: September 7, 2016
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.