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Protein

Immediate early response 3-interacting protein 1

Gene

ier3ip1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

May be involved in protein transport between endoplasmic reticulum and Golgi apparatus.By similarity

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Immediate early response 3-interacting protein 1
Gene namesi
Name:ier3ip1By similarity
ORF Names:zgc:112367
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 10

Organism-specific databases

ZFINiZDB-GENE-050506-106. ier3ip1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei2 – 2221HelicalSequence analysisAdd
BLAST
Transmembranei62 – 8221HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8282Immediate early response 3-interacting protein 1PRO_0000257964Add
BLAST

Proteomic databases

PaxDbiQ4VBI2.

Expressioni

Gene expression databases

BgeeiENSDARG00000039601.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000057864.

Family & Domainsi

Sequence similaritiesi

Belongs to the YOS1 family.Sequence analysis

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG4779. Eukaryota.
ENOG4111WBM. LUCA.
GeneTreeiENSGT00510000047648.
HOGENOMiHOG000192480.
HOVERGENiHBG081806.
InParanoidiQ4VBI2.
OMAiAVNSVCI.
OrthoDBiEOG091G191B.
PhylomeDBiQ4VBI2.
TreeFamiTF300263.

Family and domain databases

InterProiIPR013880. Yos1.
[Graphical view]
PANTHERiPTHR15858. PTHR15858. 1 hit.
PfamiPF08571. Yos1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4VBI2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFTLYALIQ TAILFTNAIA VLHEERFLSK IGWGAEQGVG GFGDDPGIKA
60 70 80
QLLNLIRSVR TVMRVPLIAV NSVCIVLLLL FG
Length:82
Mass (Da):8,886
Last modified:July 5, 2005 - v1
Checksum:i18B1F2EA00334C67
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC095786 mRNA. Translation: AAH95786.1.
RefSeqiNP_001239302.1. NM_001252373.3.
UniGeneiDr.2869.

Genome annotation databases

EnsembliENSDART00000057865; ENSDARP00000057864; ENSDARG00000039601.
GeneIDi554110.
KEGGidre:554110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC095786 mRNA. Translation: AAH95786.1.
RefSeqiNP_001239302.1. NM_001252373.3.
UniGeneiDr.2869.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000057864.

Proteomic databases

PaxDbiQ4VBI2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000057865; ENSDARP00000057864; ENSDARG00000039601.
GeneIDi554110.
KEGGidre:554110.

Organism-specific databases

CTDi51124.
ZFINiZDB-GENE-050506-106. ier3ip1.

Phylogenomic databases

eggNOGiKOG4779. Eukaryota.
ENOG4111WBM. LUCA.
GeneTreeiENSGT00510000047648.
HOGENOMiHOG000192480.
HOVERGENiHBG081806.
InParanoidiQ4VBI2.
OMAiAVNSVCI.
OrthoDBiEOG091G191B.
PhylomeDBiQ4VBI2.
TreeFamiTF300263.

Miscellaneous databases

PROiQ4VBI2.

Gene expression databases

BgeeiENSDARG00000039601.

Family and domain databases

InterProiIPR013880. Yos1.
[Graphical view]
PANTHERiPTHR15858. PTHR15858. 1 hit.
PfamiPF08571. Yos1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiIR3IP_DANRE
AccessioniPrimary (citable) accession number: Q4VBI2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 5, 2005
Last modified: September 7, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.