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Q4VA98 (Q4VA98_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Zinc finger protein 219, isoform CRA_b EMBL EDL42266.1
Gene names
Name:Zfp219 MGI 1917140 EMBL AAH96486.1
ORF Names:mCG_18709 EMBL EDL42266.1
OrganismMus musculus (Mouse) EMBL AAH96486.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length681 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q4VA98 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 1F800A4242213E13

FASTA68173,227
        10         20         30         40         50         60 
MGAVGWSETR AGERRFPCPV CGKRFRFNSI LALHLRAHPG AQAFQCPHCG HRAAQRALLR 

        70         80         90        100        110        120 
SHLRTHQPER PRSPAARLLL ELEERALLRE ARLGRARSSG GMQSSPAAEG LARPQVPSSS 

       130        140        150        160        170        180 
AFRCPFCKGK FRTSAERERH LHILHRPWKC SLCSFGSSQE EELLHHSLTA HGASERPLAA 

       190        200        210        220        230        240 
TSTPEPPPPP QQEPRSALEP EPEPEPRPEP DREANPAPTP APPEEPPAPP EFRCQVCGQS 

       250        260        270        280        290        300 
FTQSWFLKGH MRKHKASFDH ACPVCGRCFK EPWFLKNHMK VHTSKLGPLR APGPGSAPAR 

       310        320        330        340        350        360 
APQPPDLSLL AYEPLGPALL LAPAPAPAER REPPSLLGYL SVRAGEVRPN GEGADPGGGR 

       370        380        390        400        410        420 
SYGGFRPLPS ALPNRARRHR TEEPEEEEEV VEAEEESWAR GRSLGSLTSL HPNPGEGSGQ 

       430        440        450        460        470        480 
PAPAAGTQAR STATQEENGL LVGGTRSEAG RGATGKDCPF CGKSFRSAHH LKVHLRVHTG 

       490        500        510        520        530        540 
ERPYKCPHCD YAGTQSGSLK YHLQRHHREQ RSSAGPGPPP EPPPPSQRGS LQPQSGAKPT 

       550        560        570        580        590        600 
QASATWVEGT ASTRPPSSST GPGSRRKPAS PGRTLRNGRG GEAEPLDLSL RAGPGGEAGA 

       610        620        630        640        650        660 
GGALHRCLFC PFATGAPELM ALHLQVHHSR RARGRRQPRA DTSPTYVRAP SGETPPSPPL 

       670        680 
EEEGSPGLSR SGEAGLGGQE R 

« Hide

References

« Hide 'large scale' references
[1]"A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W. expand/collapse author list , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Mixed EMBL EDL42266.1.
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: FVB/N EMBL AAH96486.1.
Tissue: Mammary tumor. C3 EMBL AAH96486.1.
[3]Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Mixed EMBL EDL42266.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC096486 mRNA. Translation: AAH96486.1.
CH466659 Genomic DNA. Translation: EDL42266.1.
RefSeqNP_001240625.1. NM_001253696.1.
XP_006519569.1. XM_006519506.1.
UniGeneMm.475652.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID69890.
KEGGmmu:69890.
UCSCuc011zkh.2. mouse.

Organism-specific databases

CTD69890.
MGIMGI:1917140. Zfp219.

Phylogenomic databases

eggNOGNOG327366.
HOVERGENHBG054187.
InParanoidQ4VA98.

Gene expression databases

GenevestigatorQ4VA98.

Family and domain databases

Gene3D3.30.160.60. 6 hits.
InterProIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamPF00096. zf-C2H2. 4 hits.
[Graphical view]
SMARTSM00355. ZnF_C2H2. 9 hits.
[Graphical view]
PROSITEPS00028. ZINC_FINGER_C2H2_1. 5 hits.
PS50157. ZINC_FINGER_C2H2_2. 6 hits.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSZfp219. mouse.
NextBio330553.
SOURCESearch...

Entry information

Entry nameQ4VA98_MOUSE
AccessionPrimary (citable) accession number: Q4VA98
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2005
Last sequence update: July 5, 2005
Last modified: March 19, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)