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Protein

Beta-catenin-like protein 1

Gene

Ctnnbl1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Component of the PRP19-CDC5L complex that forms an integral part of the spliceosome and is required for activating pre-mRNA splicing. Participates in AID/AICDA-mediated Ig class switching recombination (CSR). May induce apoptosis (By similarity).By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Apoptosis, mRNA processing, mRNA splicing

Enzyme and pathway databases

ReactomeiR-RNO-72163. mRNA Splicing - Major Pathway.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-catenin-like protein 1
Alternative name(s):
Nuclear-associated protein
Short name:
NAP
Gene namesi
Name:Ctnnbl1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1563558. Ctnnbl1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus, Spliceosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 563563Beta-catenin-like protein 1PRO_0000239450Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei1 – 11N-acetylmethionineBy similarity
Modified residuei91 – 911N6-acetyllysineBy similarity
Modified residuei389 – 3891PhosphoserineBy similarity
Modified residuei545 – 5451PhosphoserineCombined sources

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiQ4V8K2.
PRIDEiQ4V8K2.

PTM databases

iPTMnetiQ4V8K2.
PhosphoSiteiQ4V8K2.

Expressioni

Gene expression databases

BgeeiENSRNOG00000012021.
GenevisibleiQ4V8K2. RN.

Interactioni

Subunit structurei

Component of the PRP19-CDC5L splicing complex composed of a core complex comprising a homotetramer of PRPF19, CDC5L, PLRG1 and BCAS2, and at least three less stably associated proteins CTNNBL1, CWC15 and HSPA8. Interacts directly with CWC15 and CDC5L in the complex. Interacts with AICDA; the interaction is important for the antibody diversification activity of AICDA. Interacts with PRPF31 (via its NLS). Interacts (via its N-terminal NLS) with KPNA1 and KPNA2 (By similarity).By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000060192.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati79 – 12951HEAT 1Add
BLAST
Repeati134 – 17643HEAT 2Add
BLAST
Repeati178 – 22851ARM 1Add
BLAST
Repeati229 – 27345ARM 2Add
BLAST
Repeati274 – 32350ARM 3Add
BLAST
Repeati325 – 36339ARM 4Add
BLAST
Repeati364 – 41754ARM 5Add
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili476 – 54065By similarityAdd
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi16 – 3318Nuclear localization signalBy similarityAdd
BLAST
Motifi130 – 14011Nuclear export signal (NES)By similarityAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi22 – 254Poly-Glu
Compositional biasi68 – 758Poly-Glu

Domaini

The surface residues of the concave side of the superhelical ARM repeat region contribute to, but are not essential for NLS binding.By similarity

Sequence similaritiesi

Contains 5 ARM repeats.Curated
Contains 2 HEAT repeats.Curated

Keywords - Domaini

Coiled coil, Repeat

Phylogenomic databases

eggNOGiKOG2734. Eukaryota.
ENOG410XPFW. LUCA.
GeneTreeiENSGT00390000006931.
HOGENOMiHOG000186529.
HOVERGENiHBG051212.
InParanoidiQ4V8K2.
KOiK12864.
OMAiASMLRNC.
OrthoDBiEOG091G05SE.
PhylomeDBiQ4V8K2.

Family and domain databases

Gene3Di1.25.10.10. 2 hits.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR013180. CTNNBL1_N.
[Graphical view]
PfamiPF08216. CTNNBL. 1 hit.
[Graphical view]
SMARTiSM01156. DUF1716. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4V8K2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDVGELLSYQ PNRGTKRPRD DEEEELKTRR KQTGPRERGR YREDEATAAE
60 70 80 90 100
DADDDKKRLL QIIDRDGEEE EEEEEPLDES SVKKMILTFE KRSYKNQELR
110 120 130 140 150
IKFPDNPEKF MESELDLNDI IQEMHVVATM PDLYHLLVEL SAVQSLLGLL
160 170 180 190 200
GHDNTDVSIA VVDLLQELTD IDTLHESEEG AEVLIDALVD GQVVALLVQN
210 220 230 240 250
LERLDESVRE EADGVHNTLA IVENMAEFRP EMCTEAAQQG LLQWLLKRLK
260 270 280 290 300
AKMPFDANKL YCSEVLAILL QDNDENRELL GELDGIDVLL QQLSVFKRHN
310 320 330 340 350
PSTAEEQEMM ENLFDALCSC LMLSSNRERF LKGEGLQLMN LMLREKKISR
360 370 380 390 400
SSALKVLDHA MIGPEGADNC HKFVDILGLR TIFPLFMKSP RKIKKVGTTE
410 420 430 440 450
KEHEEHVCSI LASLLRNLRG QQRTRLLNKF TENDSEKVDR LMELHFKYLG
460 470 480 490 500
AMQVADKKIE GEKHDIVRRG EIIDNDMEDE FYLRRLDAGL FILQHICYIM
510 520 530 540 550
AEICNANVPQ IRQRVHQILN MRGSSIKIVR HIIKEYAENI GDGRSPEFRE
560
TEQKRILGLL ENF
Length:563
Mass (Da):64,948
Last modified:July 5, 2005 - v1
Checksum:i7363EFB389CFFD80
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC097352 mRNA. Translation: AAH97352.1.
RefSeqiNP_001020041.1. NM_001024870.1.
UniGeneiRn.98091.

Genome annotation databases

EnsembliENSRNOT00000066808; ENSRNOP00000060192; ENSRNOG00000012021.
GeneIDi296320.
KEGGirno:296320.
UCSCiRGD:1563558. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC097352 mRNA. Translation: AAH97352.1.
RefSeqiNP_001020041.1. NM_001024870.1.
UniGeneiRn.98091.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000060192.

PTM databases

iPTMnetiQ4V8K2.
PhosphoSiteiQ4V8K2.

Proteomic databases

PaxDbiQ4V8K2.
PRIDEiQ4V8K2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000066808; ENSRNOP00000060192; ENSRNOG00000012021.
GeneIDi296320.
KEGGirno:296320.
UCSCiRGD:1563558. rat.

Organism-specific databases

CTDi56259.
RGDi1563558. Ctnnbl1.

Phylogenomic databases

eggNOGiKOG2734. Eukaryota.
ENOG410XPFW. LUCA.
GeneTreeiENSGT00390000006931.
HOGENOMiHOG000186529.
HOVERGENiHBG051212.
InParanoidiQ4V8K2.
KOiK12864.
OMAiASMLRNC.
OrthoDBiEOG091G05SE.
PhylomeDBiQ4V8K2.

Enzyme and pathway databases

ReactomeiR-RNO-72163. mRNA Splicing - Major Pathway.

Miscellaneous databases

PROiQ4V8K2.

Gene expression databases

BgeeiENSRNOG00000012021.
GenevisibleiQ4V8K2. RN.

Family and domain databases

Gene3Di1.25.10.10. 2 hits.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR013180. CTNNBL1_N.
[Graphical view]
PfamiPF08216. CTNNBL. 1 hit.
[Graphical view]
SMARTiSM01156. DUF1716. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCTBL1_RAT
AccessioniPrimary (citable) accession number: Q4V8K2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 13, 2006
Last sequence update: July 5, 2005
Last modified: September 7, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.