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Reviewed, UniProtKB/Swiss-Prot Q4V8F8 (GL54D_RAT)

Last modified November 3, 2009. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Glycosyltransferase 54 domain-containing protein
    EC=2.4.1.-
OrganismRattus norvegicus (Rat)
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

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Protein attributes

Sequence length372 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Subcellular location

Secreted Potential.

Sequence similarities

Belongs to the glycosyltransferase 54 family.

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Ontologies

Keywords
   Cellular componentSecreted
   DomainSignal
   Molecular functionGlycosyltransferase
Transferase
   PTMGlycoprotein
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

membrane

Inferred from electronic annotation. Source: InterPro

   Molecular functiontransferase activity, transferring hexosyl groups

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential
Chain27 – 372346Glycosyltransferase 54 domain-containing protein
PRO_0000311678

Regions

Compositional bias161 – 1644Poly-Glu

Amino acid modifications

Glycosylation291N-linked (GlcNAc...) Potential
Glycosylation541N-linked (GlcNAc...) Potential
Glycosylation1431N-linked (GlcNAc...) Potential

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Sequences

Sequence LengthMass (Da)Tools
Q4V8F8-1 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 536B4E8F34046368

FASTA37243,112
        10         20         30         40         50         60 
MKTKNVNLLF ALVAVLLFGF SCFCISRMNQ TNNQLINCRN HVLEFKETML RLKNKSENNH 

        70         80         90        100        110        120 
QNLVKVLHQL KHKVAPAKPS GSILEKKVNM LDQDETVFNQ FEVLKFFLPH LRTAGNIYPD 

       130        140        150        160        170        180 
IAIGRQRAGV SFALGITTID RGNHTYLKQT LTSVLSRMTP EEEEDSVVIV SVADTDENYL 

       190        200        210        220        230        240 
KSVVHMVKTR FRKQVQSGAL EVISIPALFY PQTLLEKKTT KNAKNWQIKQ VLDFCILMLY 

       250        260        270        280        290        300 
AQPKATYYLQ LEDDIVAKKM YFTKMKDFVN SVTSKDWFYI EFSVLGFIGK LFRSKDLMDF 

       310        320        330        340        350        360 
VHFFLIFYRA KPIDVLLDDI ALLRMCSFGG PLRSCLQLKR EVRVQYKPSL FQHVGTHSSF 

       370 
PGREQHLKDH YY

« Hide

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References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Testis.
+Additional computationally mapped references.

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Cross-references

Sequence databases

BC097408 mRNA. Translation: AAH97408.1.
IPIIPI00371686.
RefSeqNP_001020837.1.
UniGeneRn.161722

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT54. Glycosyltransferase Family 54.

Genome annotation databases

EnsemblENSRNOT00000004982; ENSRNOP00000004982; ENSRNOG00000003695; Rattus norvegicus. [Genome view]
GeneID304646.
KEGGrno:304646.
UCSCNM_001025666. rat.

Organism-specific databases

CTD304646.
RGD1310572. RGD1310572.

Phylogenomic databases

HOVERGENQ4V8F8.
OMAVLDFCIL.

Gene expression databases

GenevestigatorQ4V8F8.

Family and domain databases

InterProIPR006759. Glyco_transf_54.
[Graphical view]
PANTHERPTHR12062. Glyco_transf_54. 1 hit.
PfamPF04666. Glyco_transf_54. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio653395.

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Entry information

Entry nameGL54D_RAT
AccessionPrimary (citable) accession number: Q4V8F8
Entry history
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: July 5, 2005
Last modified: November 3, 2009
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

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Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents