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Q4V8F8 (GL54D_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified November 16, 2011. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycosyltransferase 54 domain-containing protein
EC=2.4.1.-
OrganismRattus norvegicus (Rat)
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length372 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Secreted Potential.

Sequence similarities

Belongs to the glycosyltransferase 54 family.

Ontologies

Keywords
   Cellular componentSecreted
   DomainSignal
   Molecular functionGlycosyltransferase
Transferase
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

membrane

Inferred from electronic annotation. Source: InterPro

   Molecular functiontransferase activity, transferring hexosyl groups

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential
Chain27 – 372346Glycosyltransferase 54 domain-containing protein
PRO_0000311678

Regions

Compositional bias161 – 1644Poly-Glu

Amino acid modifications

Glycosylation291N-linked (GlcNAc...) Potential
Glycosylation541N-linked (GlcNAc...) Potential
Glycosylation1431N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q4V8F8 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 536B4E8F34046368

FASTA37243,112
        10         20         30         40         50         60 
MKTKNVNLLF ALVAVLLFGF SCFCISRMNQ TNNQLINCRN HVLEFKETML RLKNKSENNH 

        70         80         90        100        110        120 
QNLVKVLHQL KHKVAPAKPS GSILEKKVNM LDQDETVFNQ FEVLKFFLPH LRTAGNIYPD 

       130        140        150        160        170        180 
IAIGRQRAGV SFALGITTID RGNHTYLKQT LTSVLSRMTP EEEEDSVVIV SVADTDENYL 

       190        200        210        220        230        240 
KSVVHMVKTR FRKQVQSGAL EVISIPALFY PQTLLEKKTT KNAKNWQIKQ VLDFCILMLY 

       250        260        270        280        290        300 
AQPKATYYLQ LEDDIVAKKM YFTKMKDFVN SVTSKDWFYI EFSVLGFIGK LFRSKDLMDF 

       310        320        330        340        350        360 
VHFFLIFYRA KPIDVLLDDI ALLRMCSFGG PLRSCLQLKR EVRVQYKPSL FQHVGTHSSF 

       370 
PGREQHLKDH YY

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Testis.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC097408 mRNA. Translation: AAH97408.1.
IPIIPI00371686.
RefSeqNP_001020837.1. NM_001025666.1.
UniGeneRn.161722.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ4V8F8.

Protein family/group databases

CAZyGT54. Glycosyltransferase Family 54.

Proteomic databases

PRIDEQ4V8F8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000004982; ENSRNOP00000004982; ENSRNOG00000003695.
GeneID304646.
KEGGrno:304646.
UCSCNM_001025666. rat.

Organism-specific databases

CTD304646.
RGD1310572. RGD1310572.

Phylogenomic databases

eggNOGroNOG05732.
GeneTreeENSGT00550000074578.
HOVERGENHBG107949.
InParanoidQ4V8F8.
OMAVLDFCIL.
OrthoDBEOG4SJ5FD.

Gene expression databases

GenevestigatorQ4V8F8.

Family and domain databases

InterProIPR006759. Glyco_transf_54.
[Graphical view]
KOK00738.
PANTHERPTHR12062. Glyco_transf_54. 1 hit.
PfamPF04666. Glyco_transf_54. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio653395.

Entry information

Entry nameGL54D_RAT
AccessionPrimary (citable) accession number: Q4V8F8
Entry history
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: July 5, 2005
Last modified: November 16, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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