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Protein

Transcription factor CP2

Gene

tfcp2

Organism
Xenopus laevis (African clawed frog)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May function as a transcription factor.

GO - Molecular functioni

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription factor CP2
Gene namesi
Name:tfcp2
OrganismiXenopus laevis (African clawed frog)
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-865546 tfcp2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002280041 – 506Transcription factor CP2Add BLAST506

Interactioni

Subunit structurei

Component of the SSP (stage selector protein) complex, which appears to be a heteromer of TFCP2 and 2 copies of NFE4.By similarity

Structurei

3D structure databases

SMRiQ4V860
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni133 – 395DNA-bindingBy similarityAdd BLAST263

Sequence similaritiesi

Belongs to the grh/CP2 family. CP2 subfamily.Curated

Phylogenomic databases

HOVERGENiHBG053805
KOiK09275

Family and domain databases

CDDicd09589 SAM_TFCP2, 1 hit
InterProiView protein in InterPro
IPR007604 CP2
IPR013761 SAM/pointed_sf
IPR037599 TFCP2_SAM
PfamiView protein in Pfam
PF04516 CP2, 1 hit
SUPFAMiSSF47769 SSF47769, 1 hit

Sequencei

Sequence statusi: Complete.

Q4V860-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAWALKLPLA DEVIESGLVQ DFDASLSGIG QELGAGAYSM SDVLALPIFK
60 70 80 90 100
QEESSLPSEN ENKILPFQYV LCTATSPAVK LHEETLTYLN QGQSYEIRML
110 120 130 140 150
DNRKIGELPE LNGKLVKSIF RVVFHDRRLQ YTEHQQLEGW RWNRPGDRIL
160 170 180 190 200
DIDIPMSVGI IDPRANPTQL NTIEFLWDPA KRTSVFIQVH CISTEFTMRK
210 220 230 240 250
HGGEKGVPFR VQIDTFKENE NGEYTEHLHS ASSQIKVFKP KGADRKQKTD
260 270 280 290 300
REKMEKRTPQ EKEKYQPSYE TTILTECSPW PEITYVSNSP SPGFNSSHNS
310 320 330 340 350
FPIGEGNGSP NHQPEPPAPI VDVSAGLTPI QNLMPTSTPQ EAQQWLHRNR
360 370 380 390 400
FAAFSRLFTN FSGADLLKLT REDVIQICGP ADGIRLFNAL KGRIVRPRLT
410 420 430 440 450
IYVCQESQQL REQQQHKHEN GEPGNGAFYV YHAIYLEEMT TIELTEKIAQ
460 470 480 490 500
LFSISPHQIN QIYKQGPTGI HVLISDEMIQ NFQDESCFIL DTMKAETNDS

YHIILK
Length:506
Mass (Da):57,542
Last modified:July 5, 2005 - v1
Checksum:iA56E8A46FD2F3A5E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC097529 mRNA Translation: AAH97529.1
RefSeqiNP_001089447.1, NM_001095978.1
UniGeneiXl.53896

Genome annotation databases

GeneIDi734497
KEGGixla:734497

Similar proteinsi

Entry informationi

Entry nameiTFCP2_XENLA
AccessioniPrimary (citable) accession number: Q4V860
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 21, 2006
Last sequence update: July 5, 2005
Last modified: March 28, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

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