Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein rogdi homolog

Gene

Rogdi

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

May act as a positive regulator of cell proliferation.By similarity

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein rogdi homolog
Gene namesi
Name:Rogdi
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi1560021. Rogdi.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00003156672 – 287Protein rogdi homologAdd BLAST286

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ4V7D2.
PRIDEiQ4V7D2.

Expressioni

Gene expression databases

BgeeiENSRNOG00000003125.
GenevisibleiQ4V7D2. RN.

Family & Domainsi

Sequence similaritiesi

Belongs to the rogdi family.Curated

Phylogenomic databases

eggNOGiKOG3992. Eukaryota.
ENOG410Y6JZ. LUCA.
GeneTreeiENSGT00390000007164.
HOGENOMiHOG000008516.
HOVERGENiHBG087014.
InParanoidiQ4V7D2.
OMAiTKNFKPA.
OrthoDBiEOG091G0GOX.
PhylomeDBiQ4V7D2.
TreeFamiTF105859.

Family and domain databases

InterProiIPR028241. RAVE2/Rogdi.
[Graphical view]
PANTHERiPTHR13618:SF1. PTHR13618:SF1. 1 hit.
PfamiPF10259. Rogdi_lz. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q4V7D2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATAMAASAA ERAVLEEEFR WLLHAEVHAV LRQLQDILKE ASLRFTLPGP
60 70 80 90 100
STEGPAKQEN FILGSCGTDQ VKGVLTLQGD ALSQADVNLK MPRNNQLLHF
110 120 130 140 150
AFREDKQWKL QQIQDARNHV SQAIYLLANR DESYQFKTGA EVLKLMDAVM
160 170 180 190 200
LQLTRARNRL TTPATLTLPE IAASGLTRMF APTLPSDLLV NVYINLNKLC
210 220 230 240 250
LTVYQLHTLQ PTSTKNFRPA GGAVLHSPGA MFEWGSQRLE VSHVHKVECV
260 270 280
IPWLNDALVY FTVSLQLCQQ LKDKISVFSS YWSSRPF
Length:287
Mass (Da):32,205
Last modified:July 5, 2005 - v1
Checksum:i175D990636AE4394
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC098001 mRNA. Translation: AAH98001.1.
RefSeqiNP_001020035.1. NM_001024864.1.
UniGeneiRn.995.

Genome annotation databases

EnsembliENSRNOT00000004176; ENSRNOP00000004176; ENSRNOG00000003125.
GeneIDi287061.
KEGGirno:287061.
UCSCiRGD:1560021. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC098001 mRNA. Translation: AAH98001.1.
RefSeqiNP_001020035.1. NM_001024864.1.
UniGeneiRn.995.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ4V7D2.
PRIDEiQ4V7D2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000004176; ENSRNOP00000004176; ENSRNOG00000003125.
GeneIDi287061.
KEGGirno:287061.
UCSCiRGD:1560021. rat.

Organism-specific databases

CTDi79641.
RGDi1560021. Rogdi.

Phylogenomic databases

eggNOGiKOG3992. Eukaryota.
ENOG410Y6JZ. LUCA.
GeneTreeiENSGT00390000007164.
HOGENOMiHOG000008516.
HOVERGENiHBG087014.
InParanoidiQ4V7D2.
OMAiTKNFKPA.
OrthoDBiEOG091G0GOX.
PhylomeDBiQ4V7D2.
TreeFamiTF105859.

Miscellaneous databases

PROiQ4V7D2.

Gene expression databases

BgeeiENSRNOG00000003125.
GenevisibleiQ4V7D2. RN.

Family and domain databases

InterProiIPR028241. RAVE2/Rogdi.
[Graphical view]
PANTHERiPTHR13618:SF1. PTHR13618:SF1. 1 hit.
PfamiPF10259. Rogdi_lz. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiROGDI_RAT
AccessioniPrimary (citable) accession number: Q4V7D2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: July 5, 2005
Last modified: September 7, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.