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Q4V3B3 (BGL28_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-glucosidase 28

Short name=AtBGLU28
EC=3.2.1.21
Gene names
Name:BGLU28
Ordered Locus Names:At2g44460
ORF Names:F4I1.27
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length582 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sequence similarities

Belongs to the glycosyl hydrolase 1 family.

Sequence caution

The sequence AAC16092.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential
Chain22 – 582561Beta-glucosidase 28
PRO_0000389590

Regions

Region469 – 4702Substrate binding By similarity

Sites

Active site1971Proton donor By similarity
Active site4121Nucleophile By similarity
Binding site481Substrate By similarity
Binding site1511Substrate By similarity
Binding site1961Substrate By similarity
Binding site3401Substrate By similarity
Binding site4621Substrate By similarity

Amino acid modifications

Glycosylation2551N-linked (GlcNAc...) Potential
Glycosylation3301N-linked (GlcNAc...) Potential
Glycosylation3701N-linked (GlcNAc...) Potential
Glycosylation4301N-linked (GlcNAc...) Potential
Glycosylation5211N-linked (GlcNAc...) Potential
Glycosylation5441N-linked (GlcNAc...) Potential
Disulfide bond216 ↔ 224 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q4V3B3 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 6F551146E571F180

FASTA58267,299
        10         20         30         40         50         60 
MKMHFFILLV ITSWLSEKIT SLPPDSRVFD RHGFPDNFVF GTAASAFQYE GATSEGGKSP 

        70         80         90        100        110        120 
SIWDYFSHTF PERTRMQNAD VAVDFYHRYK DDIKLMKELN MDAFRFSISW ARLIPSGKVK 

       130        140        150        160        170        180 
DGVNKEGVEF YKALIDELVA NGIEPSMTLY HWDHPQSLED EYGGFLSPQI VEDFRDFSRV 

       190        200        210        220        230        240 
CFEEFGDKVK MWTTINEPYV ITVAGYDTGN KAVGRCSKWV NSKCQGGDSG TEPYIASHHL 

       250        260        270        280        290        300 
LLAHAAAVQE FRKCNKTQDG QIGIVLSPLW FEPYDSASPA DNEAVKRALA TELDWHLDPV 

       310        320        330        340        350        360 
IHGDYPEMMK KLAGNRLPSF TPEQSKMLKN SSDFIGINYY TARYVAHIPQ ADPARPRFVT 

       370        380        390        400        410        420 
DHQLQWRVTN HSNHQFGPGE DRGILQSHPE GLRKVLNYIK DKYNNPIVYI KENGINDYDD 

       430        440        450        460        470        480 
GTKSREEILN DTFRISYHED HLQQLQKAII EDGCDVRGYY VWSLLDNFEW EHGYSTRFGV 

       490        500        510        520        530        540 
YYVDYDNDLT RIPKDSVNWF KQFLDVKNKE IWDVSHKERY NKTFDDVESF EASVGSILYL 

       550        560        570        580 
MTNNISRREE EERDQCAFGN LNDQSGLLLE SYNSFGFLEN VW 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. expand/collapse author list , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.
Nature 402:761-768(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Arabidopsis ORF clones."
Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.
Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1."
Xu Z., Escamilla-Trevino L.L., Zeng L., Lalgondar M., Bevan D.R., Winkel B.S.J., Mohamed A., Cheng C.-L., Shih M.-C., Poulton J.E., Esen A.
Plant Mol. Biol. 55:343-367(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC004521 Genomic DNA. Translation: AAC16092.1. Sequence problems.
CP002685 Genomic DNA. Translation: AEC10422.1.
BT023443 mRNA. Translation: AAY56434.1.
PIRT02401.
RefSeqNP_850416.1. NM_180085.3.
UniGeneAt.36757.

3D structure databases

ProteinModelPortalQ4V3B3.
SMRQ4V3B3. Positions 29-504.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3702.AT2G44460.1-P.

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Proteomic databases

PRIDEQ4V3B3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT2G44460.1; AT2G44460.1; AT2G44460.
GeneID819053.
KEGGath:AT2G44460.

Organism-specific databases

TAIRAT2G44460.

Phylogenomic databases

eggNOGCOG2723.
HOGENOMHOG000088630.
InParanoidQ4V3B3.
KOK01188.
OMAEYEWLER.
PhylomeDBQ4V3B3.
ProtClustDBCLSN2680239.

Enzyme and pathway databases

BioCycARA:AT2G44460-MONOMER.

Gene expression databases

GenevestigatorQ4V3B3.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGL28_ARATH
AccessionPrimary (citable) accession number: Q4V3B3
Secondary accession number(s): O64880
Entry history
Integrated into UniProtKB/Swiss-Prot: November 24, 2009
Last sequence update: July 5, 2005
Last modified: February 19, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names