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Q4UZL7

- GLGB2_XANC8

UniProt

Q4UZL7 - GLGB2_XANC8

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Protein

1,4-alpha-glucan branching enzyme GlgB 2

Gene
glgB2, XC_0422
Organism
Xanthomonas campestris pv. campestris (strain 8004)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei408 – 4081Nucleophile By similarity
Active sitei461 – 4611Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciXCAM314565:GCQG-419-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB 2 (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 2
Alpha-(1->4)-glucan branching enzyme 2
Glycogen branching enzyme 2
Short name:
BE 2
Gene namesi
Name:glgB2
Ordered Locus Names:XC_0422
OrganismiXanthomonas campestris pv. campestris (strain 8004)
Taxonomic identifieri314565 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000000420: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7297291,4-alpha-glucan branching enzyme GlgB 2UniRule annotationPRO_0000260715Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi314565.XC_0422.

Structurei

3D structure databases

ProteinModelPortaliQ4UZL7.
SMRiQ4UZL7. Positions 126-729.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiALEWIEH.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4UZL7-1 [UniParc]FASTAAdd to Basket

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MAEGGGGSAV ALQDLQAIAA GLPGDAFAVL GPHVQADGRL RVRVLAPGAE    50
ALGLIDGRGK LLARMQASPI DGVFEGELPA DAAYRLRIVW PDVVQEIEDP 100
YAFAPQIDES ALLQIGAGDG QALRANLGAR HVQVGELPAV RFAVWAPHAQ 150
RVAVVGDFNG WEPRRHPMRQ RSGGIWELVL PRVETGARYK YAIITADGRV 200
LLKADPVARQ SELPPATASV VASADAFAWT DAEWMARRSA AAEPAPLSIY 250
EVHAASWRRD GHDQPLDWVS LAAQLIPYVQ ELGFTHIELL PITEHPFGGS 300
WGYQPLGLYA PTARHGSPDG FAQFVDACHR AGIGVILDWV SAHFPDDAHG 350
LSQFDGSATY EHADPREGMH RDWNTLIYNY GRPEVTAYLL GSAMEWIAHY 400
HLDGLRVDAV ASMLYRDYGR AEGEWVPNAH GGRENLEAVA FLRQLTGEIA 450
SQFPGVLTIA EESTAWPGVT APISEGGLGF THKWNMGWMH DTLHYMQRDP 500
AARAQHHSQL TFGLVYAFSE RFVLPLSHDE VVHGTGGLLG QMPGDDWRRF 550
ANLRAYLALM WAHPGDKLLF MGAEFGQWAD WNHDRSLDWH LLDHAPHRGM 600
QQLVRDLNRA LRRVPALYRG NHRADGFEWS VADDARNSVL AFIRHDPDGG 650
APLLAVSNLT PQPHHDYRVG VPRAGGWREI LNTDSAHYGG SNLGNGGRLL 700
TEPTGMHGHA QSLRLTLPPL ATIYLQAEK 729
Length:729
Mass (Da):79,972
Last modified:July 5, 2005 - v1
Checksum:iC3D7257138AD810B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000050 Genomic DNA. Translation: AAY47506.1.
RefSeqiWP_011035662.1. NC_007086.1.
YP_241526.1. NC_007086.1.

Genome annotation databases

EnsemblBacteriaiAAY47506; AAY47506; XC_0422.
GeneIDi3381998.
KEGGixcb:XC_0422.
PATRICi24062074. VBIXanCam24967_0448.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000050 Genomic DNA. Translation: AAY47506.1 .
RefSeqi WP_011035662.1. NC_007086.1.
YP_241526.1. NC_007086.1.

3D structure databases

ProteinModelPortali Q4UZL7.
SMRi Q4UZL7. Positions 126-729.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 314565.XC_0422.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAY47506 ; AAY47506 ; XC_0422 .
GeneIDi 3381998.
KEGGi xcb:XC_0422.
PATRICi 24062074. VBIXanCam24967_0448.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi ALEWIEH.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci XCAM314565:GCQG-419-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris."
    Qian W., Jia Y., Ren S.-X., He Y.-Q., Feng J.-X., Lu L.-F., Sun Q., Ying G., Tang D.-J., Tang H., Wu W., Hao P., Wang L., Jiang B.-L., Zeng S., Gu W.-Y., Lu G., Rong L.
    , Tian Y., Yao Z., Fu G., Chen B., Fang R., Qiang B., Chen Z., Zhao G.-P., Tang J.-L., He C.
    Genome Res. 15:757-767(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 8004.

Entry informationi

Entry nameiGLGB2_XANC8
AccessioniPrimary (citable) accession number: Q4UZL7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: July 5, 2005
Last modified: September 3, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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