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Q4UVQ2

- Q4UVQ2_XANC8

UniProt

Q4UVQ2 - Q4UVQ2_XANC8

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene
XC_1808
Organism
Xanthomonas campestris pv. campestris (strain 8004)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciXCAM314565:GCQG-1811-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:XC_1808Imported
OrganismiXanthomonas campestris pv. campestris (strain 8004)Imported
Taxonomic identifieri314565 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000000420: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi314565.XC_1808.

Structurei

3D structure databases

ProteinModelPortaliQ4UVQ2.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiRTETWAK.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4UVQ2-1 [UniParc]FASTAAdd to Basket

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MSLSEYRRKR SFDKTREPEP GKLLPQGQRA IFVVQLHHAS RRHYDFRLQV    50
GDALKSWAVP KGPSYDPAVK RMAVEVEDHP VDYASFEGEI PKGEYGGGHV 100
AQFDHGVWAT AGDPEAQLAK GHLRFELFGS KLKGGWHLVR SSKPARQPQW 150
LLFKEDDAYA GTLEADDLLA DVAAAPAEDV RRAGAGKAQR KALTTVPVPR 200
ARARNAWTNA ALKLTHARRG DIDDAAFAPQ LAKLGQAPPE GAQWVHEIKW 250
DGYRILATVT DGQVRLWSRN ALEWTDKIPD IRDAIQALNL RSARLDGELI 300
AGRGTKEDFN LLQATLSGER QVPLALAVFD LLHIDGVEIS EAPLRERKQL 350
LQQILANAPA GHLAYSSHVE GDGLEAFRVA GEQHFEGIIS KRADRPYRGG 400
RSDDWRKTKQ LASQEYAVVG YTAPKGSRTG FGSLLLATPD PQHGWLYVGR 450
VGSGFSDTLM QEVTQHLHGG GKRPTAHIPT EDTDLRGATW FAPRFVVEVF 500
YRGIGGQQLL RQASLKAVRL DKDIADLADS DMGDVSPAQA DVADTPARGR 550
KRANKQAPAQ GEPTLSSPTK LIYPDIRATK GDVWDYYHAV MDHLLPEIVG 600
RPLSIIRCPN GAEKPCFFQK HHTAGLERVS SVRLKEETGS NAYYLVVEDA 650
PGLLELVQFN ALEFHPWGSH AARPDMADRV VFDLDPGPDV PFAEVKRAAT 700
DIRKLLAQLE LESFLRVSGG KGLHVVVPLN PGCDWELTKR FAKGFADALA 750
QSEPDRFVAT ATKRFRNKRI FVDYLRNGRG ATAVASYSLR GRPGAPVALP 800
LPWSDLAKLH RANAFTLRDV PDKLRRRRKD PWADIAQIQQ NLARWADQG 849
Length:849
Mass (Da):93,976
Last modified:July 5, 2005 - v1
Checksum:iCAA30DAEA7367B3B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000050 Genomic DNA. Translation: AAY48871.1.
RefSeqiYP_242891.1. NC_007086.1.

Genome annotation databases

EnsemblBacteriaiAAY48871; AAY48871; XC_1808.
GeneIDi3380355.
KEGGixcb:XC_1808.
PATRICi24065096. VBIXanCam24967_1947.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000050 Genomic DNA. Translation: AAY48871.1 .
RefSeqi YP_242891.1. NC_007086.1.

3D structure databases

ProteinModelPortali Q4UVQ2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 314565.XC_1808.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAY48871 ; AAY48871 ; XC_1808 .
GeneIDi 3380355.
KEGGi xcb:XC_1808.
PATRICi 24065096. VBIXanCam24967_1947.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi RTETWAK.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci XCAM314565:GCQG-1811-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris."
    Qian W., Jia Y., Ren S.X., He Y.Q., Feng J.X., Lu L.F., Sun Q., Ying G., Tang D.J., Tang H., Wu W., Hao P., Wang L., Jiang B.L., Zeng S., Gu W.Y., Lu G., Rong L.
    , Tian Y., Yao Z., Fu G., Chen B., Fang R., Qiang B., Chen Z., Zhao G.P., Tang J.L., He C.
    Genome Res. 15:757-767(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 8004Imported.

Entry informationi

Entry nameiQ4UVQ2_XANC8
AccessioniPrimary (citable) accession number: Q4UVQ2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2005
Last sequence update: July 5, 2005
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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