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Q4UVQ2

- Q4UVQ2_XANC8

UniProt

Q4UVQ2 - Q4UVQ2_XANC8

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

XC_1808

Organism
Xanthomonas campestris pv. campestris (strain 8004)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciXCAM314565:GCQG-1811-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:XC_1808Imported
OrganismiXanthomonas campestris pv. campestris (strain 8004)Imported
Taxonomic identifieri314565 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000000420: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi314565.XC_1808.

Structurei

3D structure databases

ProteinModelPortaliQ4UVQ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiRTETWAK.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4UVQ2-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSLSEYRRKR SFDKTREPEP GKLLPQGQRA IFVVQLHHAS RRHYDFRLQV
60 70 80 90 100
GDALKSWAVP KGPSYDPAVK RMAVEVEDHP VDYASFEGEI PKGEYGGGHV
110 120 130 140 150
AQFDHGVWAT AGDPEAQLAK GHLRFELFGS KLKGGWHLVR SSKPARQPQW
160 170 180 190 200
LLFKEDDAYA GTLEADDLLA DVAAAPAEDV RRAGAGKAQR KALTTVPVPR
210 220 230 240 250
ARARNAWTNA ALKLTHARRG DIDDAAFAPQ LAKLGQAPPE GAQWVHEIKW
260 270 280 290 300
DGYRILATVT DGQVRLWSRN ALEWTDKIPD IRDAIQALNL RSARLDGELI
310 320 330 340 350
AGRGTKEDFN LLQATLSGER QVPLALAVFD LLHIDGVEIS EAPLRERKQL
360 370 380 390 400
LQQILANAPA GHLAYSSHVE GDGLEAFRVA GEQHFEGIIS KRADRPYRGG
410 420 430 440 450
RSDDWRKTKQ LASQEYAVVG YTAPKGSRTG FGSLLLATPD PQHGWLYVGR
460 470 480 490 500
VGSGFSDTLM QEVTQHLHGG GKRPTAHIPT EDTDLRGATW FAPRFVVEVF
510 520 530 540 550
YRGIGGQQLL RQASLKAVRL DKDIADLADS DMGDVSPAQA DVADTPARGR
560 570 580 590 600
KRANKQAPAQ GEPTLSSPTK LIYPDIRATK GDVWDYYHAV MDHLLPEIVG
610 620 630 640 650
RPLSIIRCPN GAEKPCFFQK HHTAGLERVS SVRLKEETGS NAYYLVVEDA
660 670 680 690 700
PGLLELVQFN ALEFHPWGSH AARPDMADRV VFDLDPGPDV PFAEVKRAAT
710 720 730 740 750
DIRKLLAQLE LESFLRVSGG KGLHVVVPLN PGCDWELTKR FAKGFADALA
760 770 780 790 800
QSEPDRFVAT ATKRFRNKRI FVDYLRNGRG ATAVASYSLR GRPGAPVALP
810 820 830 840
LPWSDLAKLH RANAFTLRDV PDKLRRRRKD PWADIAQIQQ NLARWADQG
Length:849
Mass (Da):93,976
Last modified:July 5, 2005 - v1
Checksum:iCAA30DAEA7367B3B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000050 Genomic DNA. Translation: AAY48871.1.
RefSeqiYP_242891.1. NC_007086.1.

Genome annotation databases

EnsemblBacteriaiAAY48871; AAY48871; XC_1808.
GeneIDi3380355.
KEGGixcb:XC_1808.
PATRICi24065096. VBIXanCam24967_1947.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000050 Genomic DNA. Translation: AAY48871.1 .
RefSeqi YP_242891.1. NC_007086.1.

3D structure databases

ProteinModelPortali Q4UVQ2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 314565.XC_1808.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAY48871 ; AAY48871 ; XC_1808 .
GeneIDi 3380355.
KEGGi xcb:XC_1808.
PATRICi 24065096. VBIXanCam24967_1947.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi RTETWAK.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci XCAM314565:GCQG-1811-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris."
    Qian W., Jia Y., Ren S.-X., He Y.-Q., Feng J.-X., Lu L.-F., Sun Q., Ying G., Tang D.-J., Tang H., Wu W., Hao P., Wang L., Jiang B.-L., Zeng S., Gu W.-Y., Lu G., Rong L.
    , Tian Y., Yao Z., Fu G., Chen B., Fang R., Qiang B., Chen Z., Zhao G.-P., Tang J.-L., He C.
    Genome Res. 15:757-767(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 8004Imported.

Entry informationi

Entry nameiQ4UVQ2_XANC8
AccessioniPrimary (citable) accession number: Q4UVQ2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2005
Last sequence update: July 5, 2005
Last modified: October 1, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3