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Q4UVQ2

- Q4UVQ2_XANC8

UniProt

Q4UVQ2 - Q4UVQ2_XANC8

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

XC_1808

Organism
Xanthomonas campestris pv. campestris (strain 8004)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (05 Jul 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciXCAM314565:GCQG-1811-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:XC_1808Imported
    OrganismiXanthomonas campestris pv. campestris (strain 8004)Imported
    Taxonomic identifieri314565 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
    ProteomesiUP000000420: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi314565.XC_1808.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4UVQ2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiRTETWAK.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q4UVQ2-1 [UniParc]FASTAAdd to Basket

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    MSLSEYRRKR SFDKTREPEP GKLLPQGQRA IFVVQLHHAS RRHYDFRLQV    50
    GDALKSWAVP KGPSYDPAVK RMAVEVEDHP VDYASFEGEI PKGEYGGGHV 100
    AQFDHGVWAT AGDPEAQLAK GHLRFELFGS KLKGGWHLVR SSKPARQPQW 150
    LLFKEDDAYA GTLEADDLLA DVAAAPAEDV RRAGAGKAQR KALTTVPVPR 200
    ARARNAWTNA ALKLTHARRG DIDDAAFAPQ LAKLGQAPPE GAQWVHEIKW 250
    DGYRILATVT DGQVRLWSRN ALEWTDKIPD IRDAIQALNL RSARLDGELI 300
    AGRGTKEDFN LLQATLSGER QVPLALAVFD LLHIDGVEIS EAPLRERKQL 350
    LQQILANAPA GHLAYSSHVE GDGLEAFRVA GEQHFEGIIS KRADRPYRGG 400
    RSDDWRKTKQ LASQEYAVVG YTAPKGSRTG FGSLLLATPD PQHGWLYVGR 450
    VGSGFSDTLM QEVTQHLHGG GKRPTAHIPT EDTDLRGATW FAPRFVVEVF 500
    YRGIGGQQLL RQASLKAVRL DKDIADLADS DMGDVSPAQA DVADTPARGR 550
    KRANKQAPAQ GEPTLSSPTK LIYPDIRATK GDVWDYYHAV MDHLLPEIVG 600
    RPLSIIRCPN GAEKPCFFQK HHTAGLERVS SVRLKEETGS NAYYLVVEDA 650
    PGLLELVQFN ALEFHPWGSH AARPDMADRV VFDLDPGPDV PFAEVKRAAT 700
    DIRKLLAQLE LESFLRVSGG KGLHVVVPLN PGCDWELTKR FAKGFADALA 750
    QSEPDRFVAT ATKRFRNKRI FVDYLRNGRG ATAVASYSLR GRPGAPVALP 800
    LPWSDLAKLH RANAFTLRDV PDKLRRRRKD PWADIAQIQQ NLARWADQG 849
    Length:849
    Mass (Da):93,976
    Last modified:July 5, 2005 - v1
    Checksum:iCAA30DAEA7367B3B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000050 Genomic DNA. Translation: AAY48871.1.
    RefSeqiYP_242891.1. NC_007086.1.

    Genome annotation databases

    EnsemblBacteriaiAAY48871; AAY48871; XC_1808.
    GeneIDi3380355.
    KEGGixcb:XC_1808.
    PATRICi24065096. VBIXanCam24967_1947.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000050 Genomic DNA. Translation: AAY48871.1 .
    RefSeqi YP_242891.1. NC_007086.1.

    3D structure databases

    ProteinModelPortali Q4UVQ2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 314565.XC_1808.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY48871 ; AAY48871 ; XC_1808 .
    GeneIDi 3380355.
    KEGGi xcb:XC_1808.
    PATRICi 24065096. VBIXanCam24967_1947.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi RTETWAK.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci XCAM314565:GCQG-1811-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris."
      Qian W., Jia Y., Ren S.-X., He Y.-Q., Feng J.-X., Lu L.-F., Sun Q., Ying G., Tang D.-J., Tang H., Wu W., Hao P., Wang L., Jiang B.-L., Zeng S., Gu W.-Y., Lu G., Rong L.
      , Tian Y., Yao Z., Fu G., Chen B., Fang R., Qiang B., Chen Z., Zhao G.-P., Tang J.-L., He C.
      Genome Res. 15:757-767(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 8004Imported.

    Entry informationi

    Entry nameiQ4UVQ2_XANC8
    AccessioniPrimary (citable) accession number: Q4UVQ2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2005
    Last sequence update: July 5, 2005
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3