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Q4USH4 (Q4USH4_XANC8) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length534 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AAY49999.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q4USH4 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 07F364B3409005AC

FASTA53459,840
        10         20         30         40         50         60 
MKRFAALYRT LDRSTGTLDK RAALVAYFRA APPLDAAWAL YLLAGGKVAS ARMRIAASGE 

        70         80         90        100        110        120 
LREWIAEAAG IADWLVADSY DHVGDLAETL ALLLDDPASE AVDVSLAEWI EQRLLPIANQ 

       130        140        150        160        170        180 
DVAVRKHCIV QAWRTLAFDE RLVFNKLLTG ALRVGVSQRL VQQALAELSG VDIARIAQRM 

       190        200        210        220        230        240 
LGSWRPHATY VADLLTHEAL PGDRQQPYPF FLASPLEADV ESLGAIDDWL LEWKWDGIRL 

       250        260        270        280        290        300 
QLLRRAGEAA LWSRGEERLD GRFPEIEQAA MGLPDGTVID GELLAWQPEQ LLPMPFTALQ 

       310        320        330        340        350        360 
TRIQRLKPGP KTLAAAPARV VAYDLLELDG EDLRERPLHA RRALLERVLA TLADPRIIAS 

       370        380        390        400        410        420 
PLVHSTDWQA AAQVRLDARA RGVEGLMLKR ARSPYQSGRR RGDWWKWKID PLTIDAVLLY 

       430        440        450        460        470        480 
AQAGHGRRST LYTDYTFGLW HDGALVPIAK AYSGLDDTEI LQLDRWIRAN TTERFGPVRA 

       490        500        510        520        530 
VTPHHVFELG FEGVNRSTRH KSGIAVRFPR ILRWRHDKPF AEADHLSSLQ ALAR 

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References

[1]"Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris."
Qian W., Jia Y., Ren S.X., He Y.Q., Feng J.X., Lu L.F., Sun Q., Ying G., Tang D.J., Tang H., Wu W., Hao P., Wang L., Jiang B.L., Zeng S., Gu W.Y., Lu G., Rong L. expand/collapse author list , Tian Y., Yao Z., Fu G., Chen B., Fang R., Qiang B., Chen Z., Zhao G.P., Tang J.L., He C.
Genome Res. 15:757-767(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 8004 EMBL AAY49999.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000050 Genomic DNA. Translation: AAY49999.1.
RefSeqYP_244019.1. NC_007086.1.

3D structure databases

ProteinModelPortalQ4USH4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING314565.XC_2951.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY49999; AAY49999; XC_2951.
GeneID3378569.
KEGGxcb:XC_2951.
PATRIC24067501. VBIXanCam24967_3129.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGQPYPFF.
OrthoDBEOG6Q8HXT.
ProtClustDBPRK09247.

Enzyme and pathway databases

BioCycXCAM314565:GCQG-2964-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ4USH4_XANC8
AccessionPrimary (citable) accession number: Q4USH4
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2005
Last sequence update: July 5, 2005
Last modified: April 16, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)