Q4UPB9 (Q4UPB9_XANC8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-xylosidase EMBL AAY51104.1

Gene names

Ordered Locus Names:

XC_4065

Organism

Xanthomonas campestris pv. campestris (strain 8004) [Complete proteome] [HAMAP]

Taxonomic identifier

314565 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	521 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q4UPB9 [UniParc]. Last modified July 5, 2005. Version 1. Checksum: 0CEB4EB7FEDDFD0E	FASTA	521	58,398
	10 20 30 40 50 60 MRLTLLLATT LACCTATAAS AQPAAQREIQ LDIASAGASV DRFYALSVGS DFPGTLIRDD 70 80 90 100 110 120 TQAHLLPAVQ ELGFRYIRFH DVFHDVLGTV KEVDGTLVYD WTQLDKLYDA LLAKKIRPFV 130 140 150 160 170 180 ELGFTPTAMK TSEQTLFYWK GNTSHPDPAK WTQLIDAYVR HIRARYGADE VRQWYFEVWN 190 200 210 220 230 240 EPNLKDFWEN ADQQAYFDLY ANTARTIKAI DPQLRVGGPS TAGAAWVPEL LAFVQKNKLP 250 260 270 280 290 300 IDFVTTHTYG VDGGFLDEDG KQDTKLSASP EAIVGDVRRV RAQIQASPYP DLPLFFTEWS 310 320 330 340 350 360 SSYTPRDFVH DSYISAPYIL TKLKQVQGLV HGMSYWTYTD LFEEPGPPPT PFHGGFGLMN 370 380 390 400 410 420 REGIRKPAWF AYKYLNALQG RSLAVDDAHT LAAVDGKRIA AVAWDWQQPV QAVSNTPFYT 430 440 450 460 470 480 RQVPASDSKA IVFRLAHVPA GTYRLQVRKT GYRRNDPLSL YIDMGMPKQL AADQLIQLQQ 490 500 510 520 ATRDAPEQDR RVRVGADGAV AVTVPMRSND VVLLTLEPAT R

References

[1]

"Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris." Qian W., Jia Y., Ren S.-X., He Y.-Q., Feng J.-X., Lu L.-F., Sun Q., Ying G., Tang D.-J., Tang H., Wu W., Hao P., Wang L., Jiang B.-L., Zeng S., Gu W.-Y., Lu G., Rong L. , Tian Y., Yao Z., Fu G., Chen B., Fang R., Qiang B., Chen Z., Zhao G.-P., Tang J.-L., He C. Genome Res. 15:757-767(2005) [PubMed: 15899963] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000050 Genomic DNA. Translation: AAY51104.1.
RefSeq	YP_245124.1. NC_007086.1.
3D structure databases
ProteinModelPortal	Q4UPB9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q4UPB9.
Protein family/group databases
CAZy	GH39. Glycoside Hydrolase Family 39.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3379684.
GenomeReviews	Gene locus XC_4065 in contig CP000050_GR.
KEGG	xcb:XC_4065.
PATRIC	24069913. VBIXanCam24967_4308.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3664.
HOGENOM	HBG312506.
OMA	TEWSSSY.
ProtClustDB	CLSK872918.
Enzyme and pathway databases
BioCyc	XCAM314565:XC_4065-MONOMER.
Family and domain databases
InterPro	IPR000514. Glyco_hydro_39. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01198.
Pfam	PF01229. Glyco_hydro_39. 1 hit. [Graphical view]
PRINTS	PR00745. GLHYDRLASE39.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01027. GLYCOSYL_HYDROL_F39. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q4UPB9_XANC8

Accession

Primary (citable) accession number: Q4UPB9

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2005
Last sequence update:	July 5, 2005
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)