Q4UNZ4 (XYLA2_XANC8) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 40.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Xylose isomerase 2 EC=5.3.1.5 | ||||
| Gene names |
| ||||
| Organism | Xanthomonas campestris pv. campestris (strain 8004) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 314565 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas |
Protein attributes
| Sequence length | 446 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | D-xylose = D-xylulose. HAMAP MF_00455 |
| Cofactor | Binds 2 magnesium ions per subunit By similarity. HAMAP MF_00455 |
| Subunit structure | Homotetramer By similarity. HAMAP MF_00455 |
| Subcellular location | Cytoplasm By similarity HAMAP MF_00455. |
| Sequence similarities | Belongs to the xylose isomerase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbohydrate metabolism Pentose shunt Xylose metabolism |
| Cellular component | Cytoplasm |
| Ligand | Magnesium Metal-binding |
| Molecular function | Isomerase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | D-xylose metabolic process Inferred from electronic annotation. Source: UniProtKB-KW pentose-phosphate shuntInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW xylose isomerase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 446 | 446 | Xylose isomerase 2 HAMAP MF_00455 | PRO_0000236976 | |||||
Sites | |||||||||
| Active site | 109 | 1 | By similarity | ||||||
| Active site | 112 | 1 | By similarity | ||||||
| Metal binding | 240 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 276 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 276 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 279 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 304 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 315 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 317 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 347 | 1 | Magnesium 1 By similarity | ||||||
Sequences
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References
| [1] | "Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris." Qian W., Jia Y., Ren S.-X., He Y.-Q., Feng J.-X., Lu L.-F., Sun Q., Ying G., Tang D.-J., Tang H., Wu W., Hao P., Wang L., Jiang B.-L., Zeng S., Gu W.-Y., Lu G., Rong L. He C.Genome Res. 15:757-767(2005) [PubMed: 15899963] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 8004. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000050 Genomic DNA. Translation: AAY51229.1. |
| RefSeq | YP_245249.1. NC_007086.1. |
3D structure databases | |
| ProteinModelPortal | Q4UNZ4. |
| SMR | Q4UNZ4. Positions 10-446. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q4UNZ4. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 3379809. |
| GenomeReviews | Gene locus XC_4191 in contig CP000050_GR. |
| KEGG | xcb:XC_4191. |
| PATRIC | 24070185. VBIXanCam24967_4444. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG2115. |
| HOGENOM | HBG297199. |
| OMA | LLGWDTD. |
| PhylomeDB | Q4UNZ4. |
| ProtClustDB | PRK12465. |
Enzyme and pathway databases | |
| BioCyc | XCAM314565:XC_4191-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00455. Xylose_isom_A. [Tree] |
| InterPro | IPR013022. Xyl_isomerase-like_TIM-brl. IPR012307. Xyl_isomerase_TIM-brl. IPR013452. Xylose_isom_bac. IPR001998. Xylose_isomerase. [Graphical view] |
| Gene3D | G3DSA:3.20.20.150. Xyl_isomerase-like_TIM-brl. 1 hit. |
| KO | K01805. |
| Pfam | PF01261. AP_endonuc_2. 1 hit. [Graphical view] |
| PRINTS | PR00688. XYLOSISMRASE. |
| SUPFAM | SSF51658. Xyl_isomerase-like_TIM-brl. 1 hit. |
| TIGRFAMs | TIGR02630. Xylose_isom_A. 1 hit. |
| PROSITE | PS51415. XYLOSE_ISOMERASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | XYLA2_XANC8 | ||||||||
| Accession | Primary (citable) accession number: Q4UNZ4 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

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