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Reviewed, UniProtKB/Swiss-Prot Q4UNE7 (Y060_RICFE)

Last modified December 15, 2009. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Putative outer membrane protein RF_0060
Gene names
Ordered Locus Names: RF_0060
OrganismRickettsia felis (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier42862 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length244 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

General annotation (Comments)

Subcellular location

Cell outer membrane By similarity.

Sequence similarities

Belongs to the ompW/alkL family.

Ontologies

Keywords
   Cellular componentCell membrane
Cell outer membrane
Membrane
   DomainSignal
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcell outer membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential
Chain24 – 244221Putative outer membrane protein RF_0060
PRO_0000262722

Sequences

Sequence LengthMass (Da)Tools
Q4UNE7-1 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: F12A20040F78B588

FASTA24426,552
        10         20         30         40         50         60 
MLRIVKKLGI ILFVSSISIN SFAKSMYDDV DSAPDYDSTP YYENEGSLVF KMRLGGVFSS 

        70         80         90        100        110        120 
AKQKGLPTPT SPQPVPVGEV AKNGYGGDAS TTIFFNNYLA TELSLGFNVL RTKYTSLAAV 

       130        140        150        160        170        180 
AHNYGVNNVK LGKNKPIYMI PATVTGQFHI APYGGIRPYV GVGYHGSYML TQATGLKIRN 

       190        200        210        220        230        240 
GHGLVGQIGV DFYAKDDTLI NIDVRQFFLN PKLEYKPNLV GTKTVTSKVK LNPLIVSIGI 


GFTF 

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References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed: 15984913] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

CP000053 Genomic DNA. Translation: AAY60911.1.
RefSeqYP_246076.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3401243.
GenomeReviewsGene locus RF_0060 in contig CP000053_GR.
KEGGrfe:RF_0060.
NMPDRfig|315456.3.peg.542.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG663968.
OMAEVAKNGY.

Enzyme and pathway databases

BioCycRFEL315456:RF_0060-MON.

Family and domain databases

InterProIPR005618. OMPW.
[Graphical view]
PfamPF03922. OmpW. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY060_RICFE
AccessionPrimary (citable) accession number: Q4UNE7
Entry history
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: July 5, 2005
Last modified: December 15, 2009
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents