Reviewed, UniProtKB/Swiss-Prot Q4UNB8 (Y089_RICFE)

Names and origin

Protein names

Recommended name:
    Uncharacterized protein RF_0089

Gene names

Ordered Locus Names:

RF_0089

Organism

Rickettsia felis (Rickettsia azadi) [Complete proteome] [HAMAP]

Taxonomic identifier

42862 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group

Protein attributes

Sequence length	1138 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the trbL/virB6 family.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Signal Transmembrane
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	conjugation with cellular fusion Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 28	28	Potential
	Chain	29 – 1138	1110	Uncharacterized protein RF_0089		PRO_0000269204
Regions
	Transmembrane	331 – 351	21	Potential
	Transmembrane	359 – 379	21	Potential
	Transmembrane	392 – 412	21	Potential
	Transmembrane	494 – 514	21	Potential
	Transmembrane	520 – 540	21	Potential
	Transmembrane	554 – 574	21	Potential
	Transmembrane	699 – 719	21	Potential

Sequences

	Sequence		Length	Mass (Da)
	Q4UNB8-1 [UniParc]. Last modified July 5, 2005. Version 1. Checksum: 3078D631C0DFAF94	FASTA	1,138	124,823
	10 20 30 40 50 60 MKLFPRSILI ILVLSFALNL GLVTKTHAKD TLDSIVDILS GLTCETQGVG DLLRTEFSHT 70 80 90 100 110 120 CIVAPFFTFA VMNLVSPVLY MNTFLKLKIN DSDLFNDSNF GNFPGGQCTR ENRIDPKNPE 130 140 150 160 170 180 LRFALCNNAK LIVSRAKSVA ESALAIAKAV LTGGDPWDDI KKAWENKKKE YHIPYSGKPG 190 200 210 220 230 240 DDGFAFDAGF PVIYWKIIQD KDRICVSTKG FTGDVPVGCK YMKEPFPKSM YNSFMDVADK 250 260 270 280 290 300 DFIQDPKETP TDPLALVSCS AAGGGCYQKA YNASKTAVVM TSPLIECMRQ MIARLLISKD 310 320 330 340 350 360 VCSFDNVEQV VNLASRQDSA LFQFQVGMYK IVTAFLTLYV MFFGFKLLLA GEIPPKSEYI 370 380 390 400 410 420 NFILKMIFVT YFSIGINITP GNGSPYDRLD GMIQWAFPFL LDGINGLASW VMNAAPSGLC 430 440 450 460 470 480 KFNNLSYDGT VSYIALWDAL DCRVAHYLGL DILSTLLVEN AYRSHDFLNF DFFSFSAPPY 490 500 510 520 530 540 IYLLIPAIIS GNMMLVSLAL SYPLLVISVA AFMVNATIMC MISIVILGIL APLFVPMFLF 550 560 570 580 590 600 TYTRNYFDSW VKLMISFLLQ PMVVVTFMIT MFSVYDYGFY GKCQYKSKLI HNSIENLAQS 610 620 630 640 650 660 GGTSSRDVLI FYINNDWDDI SQYPDKDAVE SCQNSLGYML NNPITTAFNF AKDSVSEIVD 670 680 690 700 710 720 SKPGDTPTDK FLAKFQFLSG VVLGPGMFFM SPKVLFEKIK NILLALVTAC FTLYLMYNFS 730 740 750 760 770 780 SQLAEFAADM TEGVALNNVA IKPQAIFKAG MAALAAAGAA TKGVDQIASR GGVGDLKAGQ 790 800 810 820 830 840 GGGVSDNIAK SGGGGPNDNI AASGGTSAPT VTTPTASSSV ATSSPKTVSS EARSDVVTPP 850 860 870 880 890 900 PAPSEAVSPP PASIRTSIST PAPQSNIETE SVGKIIRDNN QESKKEIDNT PPPQEKVDNA 910 920 930 940 950 960 APQEKVDSTS KGTGVIDYSF NLKEHENPAG VKQIRENAEI RDKRAEVEKA WNELVASGGG 970 980 990 1000 1010 1020 RIRDQQGEET SERRTNAEKK WNELVDSGVV TEIRERDNSV TNKFDKLADE LNKSEKAKVE 1030 1040 1050 1060 1070 1080 ENKNIENDRK ENNTTTSPQE KVDSTSRGSG VIDYSFNLKE HENPTGVKQI RENAEIRDKR 1090 1100 1110 1120 1130 VKVETAWNEL VASGGGRVRE QEGGEVSERR ANAVKTWDEL VKSGVVTEKK DNSSNENS

References

[1]

"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite." Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D. PLoS Biol. 3:1-12(2005) [PubMed: 15984913] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000053 Genomic DNA. Translation: AAY60940.1.
RefSeq	YP_246105.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	3401042.
GenomeReviews	Gene locus RF_0089 in contig CP000053_GR.
KEGG	rfe:RF_0089.
NMPDR	fig|315456.3.peg.608.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG664065.
OMA	YSFNLKE.
Enzyme and pathway databases
BioCyc	RFEL315456:RF_0089-MON.
Family and domain databases
InterPro	IPR007688. Conjugal_tfr_TrbL/VirB6. [Graphical view]
Pfam	PF04610. TrbL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y089_RICFE

Accession

Primary (citable) accession number: Q4UNB8

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 12, 2006
Last sequence update:	July 5, 2005
Last modified:	December 15, 2009
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)