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Protein

Uncharacterized protein RF_0092

Gene

RF_0092

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-96-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein RF_0092
Gene namesi
Ordered Locus Names:RF_0092
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
Proteomesi
  • UP000008548 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei518 – 538HelicalSequence analysisAdd BLAST21
Transmembranei567 – 587HelicalSequence analysisAdd BLAST21
Transmembranei613 – 633HelicalSequence analysisAdd BLAST21
Transmembranei651 – 671HelicalSequence analysisAdd BLAST21
Transmembranei684 – 704HelicalSequence analysisAdd BLAST21
Transmembranei775 – 795HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_000026922421 – 890Uncharacterized protein RF_0092Add BLAST870

Interactioni

Protein-protein interaction databases

STRINGi315456.RF_0092.

Family & Domainsi

Sequence similaritiesi

Belongs to the TrbL/VirB6 family.Curated

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4106Q4M. Bacteria.
COG3704. LUCA.
HOGENOMiHOG000010635.
KOiK03201.
OMAiTNGRIWG.
OrthoDBiPOG091H0NH8.

Family and domain databases

InterProiIPR007688. Conjugal_tfr_TrbL/VirB6.
[Graphical view]
PfamiPF04610. TrbL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q4UNB5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKILKSLVLL VLFMAMPAKA DDAFSWMSTS FGGLKSLFGC LEVPEFTSFK
60 70 80 90 100
EGNIGISLST AGTWQSTGNS VEKGKLLKIN WSTSGITPEP RKYLVLYRID
110 120 130 140 150
PRFSTPQVFI KTYNYSKLQF EALGFPRFVT DNNSATPGAI PPDKDLDALS
160 170 180 190 200
FTKMSDSVKY FNYSNGNSRI EVKAGDVVNI SLVGKDNFFS PNTLDNILTQ
210 220 230 240 250
ELDSSIFAAS ALYTQSNLGN FDNRIIYSSA KEVCDLIDAS RDPDKPSGCS
260 270 280 290 300
GTGSATKYKS INSNEALVGK PMITRAVQNF MGLINSCPAN AGINTSPACY
310 320 330 340 350
YDQGRGMIIK VGGQVIKERD QSFVNSGSTQ SSFIYYQATS GGTMDFTSDW
360 370 380 390 400
QVNNMFSNSV LMSDWSRNFS NYANFVDYIN KNDWSANFLY FGRYSMIVEI
410 420 430 440 450
GNGANSINPG DQQNISLEYL ITSDGTLPDP SVRGTPVDYN FAADAPQDGY
460 470 480 490 500
LWLRVVNPNS NIQGVVSVNY ANYTGTTWFS DIIYNGAIKP ITDQFRTFSQ
510 520 530 540 550
NFYIKLVKNS AVQNIAKAAL TLYVTIFGLM FVAGALKLTA VEVITRICKI
560 570 580 590 600
AIVAFLIREE SWSFFNTYFF SAFTNGIDFF VTNVVGATSS RANIFGFIDP
610 620 630 640 650
IFDKYTNGRI WGLLFIELLQ IHNGLAFIAI ITIYSLITYF RAILEVIIGY
660 670 680 690 700
VIAFIGLTVM ISLAPFFIIL MLFEKTKSLF DNWISTLLSY VVQPTILLIF
710 720 730 740 750
FLLIDQVLSE QLLKVVVRAC WDTLIPIKIG LDLTNLGIPI NFSFTLPFLP
760 770 780 790 800
GIPFYVPDVP EISSSNILTN KANTFLVLFT TALLFYSYCL MSYGLVTFVN
810 820 830 840 850
IVVGMLTNVT PARISGNYQE RSDPVGAVMQ DIGSVTKPIK KAAMAPARVF
860 870 880 890
KDKIIDQNYK ARKPEGGEHT NKFLAERNDV PKKEEGERKE
Length:890
Mass (Da):98,819
Last modified:July 5, 2005 - v1
Checksum:i40ABF2689D95DA17
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY60943.1.
RefSeqiWP_011270446.1. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY60943; AAY60943; RF_0092.
KEGGirfe:RF_0092.
PATRICi17890524. VBIRicFel64634_0105.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000053 Genomic DNA. Translation: AAY60943.1.
RefSeqiWP_011270446.1. NC_007109.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi315456.RF_0092.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY60943; AAY60943; RF_0092.
KEGGirfe:RF_0092.
PATRICi17890524. VBIRicFel64634_0105.

Phylogenomic databases

eggNOGiENOG4106Q4M. Bacteria.
COG3704. LUCA.
HOGENOMiHOG000010635.
KOiK03201.
OMAiTNGRIWG.
OrthoDBiPOG091H0NH8.

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-96-MONOMER.

Family and domain databases

InterProiIPR007688. Conjugal_tfr_TrbL/VirB6.
[Graphical view]
PfamiPF04610. TrbL. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY092_RICFE
AccessioniPrimary (citable) accession number: Q4UNB5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: July 5, 2005
Last modified: September 7, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.