Q4UNB5 (Y092_RICFE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein RF_0092

Gene names

Ordered Locus Names:

RF_0092

Organism

Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]

Taxonomic identifier

315456 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group › Rickettsia felis

Protein attributes

Sequence length	890 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the TrbL/VirB6 family.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Signal Transmembrane Transmembrane helix
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	protein secretion by the type IV secretion system Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 20	20	Potential
	Chain	21 – 890	870	Uncharacterized protein RF_0092		PRO_0000269224
Regions
	Transmembrane	518 – 538	21	Helical; Potential
	Transmembrane	567 – 587	21	Helical; Potential
	Transmembrane	613 – 633	21	Helical; Potential
	Transmembrane	651 – 671	21	Helical; Potential
	Transmembrane	684 – 704	21	Helical; Potential
	Transmembrane	775 – 795	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	Q4UNB5 [UniParc]. Last modified July 5, 2005. Version 1. Checksum: 40ABF2689D95DA17	FASTA	890	98,819
	10 20 30 40 50 60 MKILKSLVLL VLFMAMPAKA DDAFSWMSTS FGGLKSLFGC LEVPEFTSFK EGNIGISLST 70 80 90 100 110 120 AGTWQSTGNS VEKGKLLKIN WSTSGITPEP RKYLVLYRID PRFSTPQVFI KTYNYSKLQF 130 140 150 160 170 180 EALGFPRFVT DNNSATPGAI PPDKDLDALS FTKMSDSVKY FNYSNGNSRI EVKAGDVVNI 190 200 210 220 230 240 SLVGKDNFFS PNTLDNILTQ ELDSSIFAAS ALYTQSNLGN FDNRIIYSSA KEVCDLIDAS 250 260 270 280 290 300 RDPDKPSGCS GTGSATKYKS INSNEALVGK PMITRAVQNF MGLINSCPAN AGINTSPACY 310 320 330 340 350 360 YDQGRGMIIK VGGQVIKERD QSFVNSGSTQ SSFIYYQATS GGTMDFTSDW QVNNMFSNSV 370 380 390 400 410 420 LMSDWSRNFS NYANFVDYIN KNDWSANFLY FGRYSMIVEI GNGANSINPG DQQNISLEYL 430 440 450 460 470 480 ITSDGTLPDP SVRGTPVDYN FAADAPQDGY LWLRVVNPNS NIQGVVSVNY ANYTGTTWFS 490 500 510 520 530 540 DIIYNGAIKP ITDQFRTFSQ NFYIKLVKNS AVQNIAKAAL TLYVTIFGLM FVAGALKLTA 550 560 570 580 590 600 VEVITRICKI AIVAFLIREE SWSFFNTYFF SAFTNGIDFF VTNVVGATSS RANIFGFIDP 610 620 630 640 650 660 IFDKYTNGRI WGLLFIELLQ IHNGLAFIAI ITIYSLITYF RAILEVIIGY VIAFIGLTVM 670 680 690 700 710 720 ISLAPFFIIL MLFEKTKSLF DNWISTLLSY VVQPTILLIF FLLIDQVLSE QLLKVVVRAC 730 740 750 760 770 780 WDTLIPIKIG LDLTNLGIPI NFSFTLPFLP GIPFYVPDVP EISSSNILTN KANTFLVLFT 790 800 810 820 830 840 TALLFYSYCL MSYGLVTFVN IVVGMLTNVT PARISGNYQE RSDPVGAVMQ DIGSVTKPIK 850 860 870 880 890 KAAMAPARVF KDKIIDQNYK ARKPEGGEHT NKFLAERNDV PKKEEGERKE

References

[1]

"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite." Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D. PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000053 Genomic DNA. Translation: AAY60943.1.
RefSeq	YP_246108.1. NC_007109.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	315456.RF_0092.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAY60943; AAY60943; RF_0092.
GeneID	3401061.
KEGG	rfe:RF_0092.
PATRIC	17890524. VBIRicFel64634_0105.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3704.
HOGENOM	HOG000010635.
KO	K03201.
OMA	VMISLAP.
ProtClustDB	CLSK870747.
Family and domain databases
InterPro	IPR007688. Conjugal_tfr_TrbL/VirB6. [Graphical view]
Pfam	PF04610. TrbL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y092_RICFE

Accession

Primary (citable) accession number: Q4UNB5

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 12, 2006
Last sequence update:	July 5, 2005
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program