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Q4UN64

- RS6_RICFE

UniProt

Q4UN64 - RS6_RICFE

Protein

30S ribosomal protein S6

Gene

rpsF

Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds together with S18 to 16S ribosomal RNA.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciRFEL315456:GKEK-147-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S6UniRule annotation
    Gene namesi
    Name:rpsFUniRule annotation
    Ordered Locus Names:RF_0143
    OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
    Taxonomic identifieri315456 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000008548: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 12112130S ribosomal protein S6PRO_0000229573Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi315456.RF_0143.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4UN64.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S6P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0360.
    HOGENOMiHOG000040439.
    KOiK02990.
    OMAiFWIRRTW.
    OrthoDBiEOG6P33DH.

    Family and domain databases

    Gene3Di3.30.70.60. 1 hit.
    HAMAPiMF_00360. Ribosomal_S6.
    InterProiIPR000529. Ribosomal_S6.
    IPR020814. Ribosomal_S6_plastid/chlpt.
    IPR014717. Transl_elong_EF1B/ribosomal_S6.
    [Graphical view]
    PfamiPF01250. Ribosomal_S6. 1 hit.
    [Graphical view]
    SUPFAMiSSF54995. SSF54995. 1 hit.
    TIGRFAMsiTIGR00166. S6. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q4UN64-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSFYESVFII RQDVSLNDID KIVDDFAKII KDNNGTIVKK EYWGLRTLAY    50
    KIGNNKKGHY YFLGLDITGN VKEELERKMK LNENIIRFLT IKADSISSEP 100
    SQILKNQSTE NTPVIDVTIN N 121
    Length:121
    Mass (Da):13,946
    Last modified:April 4, 2006 - v2
    Checksum:i9D43EB913AFF93B0
    GO

    Sequence cautioni

    The sequence AAY60994.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY60994.1. Different initiation.
    RefSeqiYP_246159.2. NC_007109.1.

    Genome annotation databases

    EnsemblBacteriaiAAY60994; AAY60994; RF_0143.
    GeneIDi3400644.
    KEGGirfe:RF_0143.
    PATRICi17890640. VBIRicFel64634_0163.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000053 Genomic DNA. Translation: AAY60994.1 . Different initiation.
    RefSeqi YP_246159.2. NC_007109.1.

    3D structure databases

    ProteinModelPortali Q4UN64.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 315456.RF_0143.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY60994 ; AAY60994 ; RF_0143 .
    GeneIDi 3400644.
    KEGGi rfe:RF_0143.
    PATRICi 17890640. VBIRicFel64634_0163.

    Phylogenomic databases

    eggNOGi COG0360.
    HOGENOMi HOG000040439.
    KOi K02990.
    OMAi FWIRRTW.
    OrthoDBi EOG6P33DH.

    Enzyme and pathway databases

    BioCyci RFEL315456:GKEK-147-MONOMER.

    Family and domain databases

    Gene3Di 3.30.70.60. 1 hit.
    HAMAPi MF_00360. Ribosomal_S6.
    InterProi IPR000529. Ribosomal_S6.
    IPR020814. Ribosomal_S6_plastid/chlpt.
    IPR014717. Transl_elong_EF1B/ribosomal_S6.
    [Graphical view ]
    Pfami PF01250. Ribosomal_S6. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54995. SSF54995. 1 hit.
    TIGRFAMsi TIGR00166. S6. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
      Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
      PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-1525 / URRWXCal2.

    Entry informationi

    Entry nameiRS6_RICFE
    AccessioniPrimary (citable) accession number: Q4UN64
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 4, 2006
    Last sequence update: April 4, 2006
    Last modified: October 1, 2014
    This is version 53 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia felis (Rickettsia azadi)
      Rickettsia felis (strain URRWXCal2): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3