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Q4UN64

- RS6_RICFE

UniProt

Q4UN64 - RS6_RICFE

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Protein

30S ribosomal protein S6

Gene
rpsF, RF_0143
Organism
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Binds together with S18 to 16S ribosomal RNA By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciRFEL315456:GKEK-147-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6
Gene namesi
Name:rpsF
Ordered Locus Names:RF_0143
OrganismiRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi)
Taxonomic identifieri315456 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000008548: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12112130S ribosomal protein S6UniRule annotationPRO_0000229573Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi315456.RF_0143.

Structurei

3D structure databases

ProteinModelPortaliQ4UN64.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0360.
HOGENOMiHOG000040439.
KOiK02990.
OMAiFWIRRTW.
OrthoDBiEOG6P33DH.

Family and domain databases

Gene3Di3.30.70.60. 1 hit.
HAMAPiMF_00360. Ribosomal_S6.
InterProiIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamiPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMiSSF54995. SSF54995. 1 hit.
TIGRFAMsiTIGR00166. S6. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4UN64-1 [UniParc]FASTAAdd to Basket

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MSFYESVFII RQDVSLNDID KIVDDFAKII KDNNGTIVKK EYWGLRTLAY    50
KIGNNKKGHY YFLGLDITGN VKEELERKMK LNENIIRFLT IKADSISSEP 100
SQILKNQSTE NTPVIDVTIN N 121
Length:121
Mass (Da):13,946
Last modified:April 4, 2006 - v2
Checksum:i9D43EB913AFF93B0
GO

Sequence cautioni

The sequence AAY60994.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000053 Genomic DNA. Translation: AAY60994.1. Different initiation.
RefSeqiYP_246159.2. NC_007109.1.

Genome annotation databases

EnsemblBacteriaiAAY60994; AAY60994; RF_0143.
GeneIDi3400644.
KEGGirfe:RF_0143.
PATRICi17890640. VBIRicFel64634_0163.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000053 Genomic DNA. Translation: AAY60994.1 . Different initiation.
RefSeqi YP_246159.2. NC_007109.1.

3D structure databases

ProteinModelPortali Q4UN64.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 315456.RF_0143.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAY60994 ; AAY60994 ; RF_0143 .
GeneIDi 3400644.
KEGGi rfe:RF_0143.
PATRICi 17890640. VBIRicFel64634_0163.

Phylogenomic databases

eggNOGi COG0360.
HOGENOMi HOG000040439.
KOi K02990.
OMAi FWIRRTW.
OrthoDBi EOG6P33DH.

Enzyme and pathway databases

BioCyci RFEL315456:GKEK-147-MONOMER.

Family and domain databases

Gene3Di 3.30.70.60. 1 hit.
HAMAPi MF_00360. Ribosomal_S6.
InterProi IPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view ]
Pfami PF01250. Ribosomal_S6. 1 hit.
[Graphical view ]
SUPFAMi SSF54995. SSF54995. 1 hit.
TIGRFAMsi TIGR00166. S6. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
    Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
    PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-1525 / URRWXCal2.

Entry informationi

Entry nameiRS6_RICFE
AccessioniPrimary (citable) accession number: Q4UN64
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 4, 2006
Last modified: May 14, 2014
This is version 52 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia felis (Rickettsia azadi)
    Rickettsia felis (strain URRWXCal2): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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