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Q4UN64 (RS6_RICFE) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S6
Gene names
Name:rpsF
Ordered Locus Names:RF_0143
OrganismRickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier315456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length121 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds together with S18 to 16S ribosomal RNA By similarity. HAMAP-Rule MF_00360

Sequence similarities

Belongs to the ribosomal protein S6P family.

Sequence caution

The sequence AAY60994.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12112130S ribosomal protein S6 HAMAP-Rule MF_00360
PRO_0000229573

Sequences

Sequence LengthMass (Da)Tools
Q4UN64 [UniParc].

Last modified April 4, 2006. Version 2.
Checksum: 9D43EB913AFF93B0

FASTA12113,946
        10         20         30         40         50         60 
MSFYESVFII RQDVSLNDID KIVDDFAKII KDNNGTIVKK EYWGLRTLAY KIGNNKKGHY 

        70         80         90        100        110        120 
YFLGLDITGN VKEELERKMK LNENIIRFLT IKADSISSEP SQILKNQSTE NTPVIDVTIN 


N 

« Hide

References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000053 Genomic DNA. Translation: AAY60994.1. Different initiation.
RefSeqYP_246159.2. NC_007109.1.

3D structure databases

ProteinModelPortalQ4UN64.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING315456.RF_0143.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAY60994; AAY60994; RF_0143.
GeneID3400644.
KEGGrfe:RF_0143.
PATRIC17890640. VBIRicFel64634_0163.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0360.
HOGENOMHOG000040439.
KOK02990.
OMAITEASPM.
OrthoDBEOG6P33DH.
ProtClustDBPRK00453.

Enzyme and pathway databases

BioCycRFEL315456:GKEK-147-MONOMER.

Family and domain databases

Gene3D3.30.70.60. 1 hit.
HAMAPMF_00360. Ribosomal_S6.
InterProIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMSSF54995. SSF54995. 1 hit.
TIGRFAMsTIGR00166. S6. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRS6_RICFE
AccessionPrimary (citable) accession number: Q4UN64
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 4, 2006
Last modified: February 19, 2014
This is version 51 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries