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Reviewed, UniProtKB/Swiss-Prot Q4UN06 (HLP_RICFE)

Last modified November 24, 2009. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Histone-like DNA-binding protein
Gene names
Ordered Locus Names: RF_0201
OrganismRickettsia felis (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier42862 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length95 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the bacterial histone-like protein family.

Ontologies

Keywords
   LigandDNA-binding
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 9595Histone-like DNA-binding protein
PRO_0000280386

Sequences

Sequence LengthMass (Da)Tools
Q4UN06-1 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 9DB0B7CE70D0415C

FASTA9510,877
        10         20         30         40         50         60 
MTITKEKIAT MLSSKLGFSN NLCEEIVNTV FFNILEIAKE QKLTLKNFGS FEVKQKNPRP 

        70         80         90 
GINFHTKSPI IIESKKNLRF IPSTKLKALI NEHDK 

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References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed: 15984913] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

CP000053 Genomic DNA. Translation: AAY61052.1.
RefSeqYP_246217.1.

3D structure databases

HSSPHSSP built from PDB template 1OWF based on UniProtKB P0A6X7.
ModBaseSearch...

Genome annotation databases

GeneID3400390.
GenomeReviewsGene locus RF_0201 in contig CP000053_GR.
KEGGrfe:RF_0201.
NMPDRfig|315456.3.peg.35.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ4UN06.
OMAGFSNNLC

Enzyme and pathway databases

BioCycRFEL315456:RF_0201-MON.

Family and domain databases

InterProIPR000119. Hist_DNA_bd_bac.
IPR010992. IHF-like_DNA_bd.
[Graphical view]
Gene3DG3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
PfamPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
SMARTSM00411. BHL. 1 hit.
[Graphical view]
PROSITEPS00045. HISTONE_LIKE. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameHLP_RICFE
AccessionPrimary (citable) accession number: Q4UN06
Entry history
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: July 5, 2005
Last modified: November 24, 2009
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents